Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.77■□□□□ 0.76
MT-ND1P03886 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.77■□□□□ 0.76
MT-ND1P03886 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.77■□□□□ 0.76
MT-ND1P03886 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.77■□□□□ 0.76
MT-ND1P03886 pRNA.6-201ENST00000610482 90 ntBASIC19.77■□□□□ 0.76
MT-ND1P03886 pRNA.5-201ENST00000612139 90 ntBASIC19.77■□□□□ 0.76
MT-ND1P03886 pRNA.11-201ENST00000618423 90 ntBASIC19.77■□□□□ 0.76
MT-ND1P03886 pRNA.13-201ENST00000619112 90 ntBASIC19.77■□□□□ 0.76
MT-ND1P03886 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
MT-ND1P03886 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
MT-ND1P03886 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
MT-ND1P03886 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.76■□□□□ 0.75
MT-ND1P03886 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
MT-ND1P03886 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
MT-ND1P03886 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.76■□□□□ 0.75
MT-ND1P03886 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MT-ND1P03886 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MT-ND1P03886 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
MT-ND1P03886 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.76■□□□□ 0.75
MT-ND1P03886 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MT-ND1P03886 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.76■□□□□ 0.75
MT-ND1P03886 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.76■□□□□ 0.75
MT-ND1P03886 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.76■□□□□ 0.75
MT-ND1P03886 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
MT-ND1P03886 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MT-ND1P03886 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
MT-ND1P03886 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
MT-ND1P03886 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MT-ND1P03886 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MT-ND1P03886 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.75■□□□□ 0.75
MT-ND1P03886 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
MT-ND1P03886 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.75■□□□□ 0.75
MT-ND1P03886 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MT-ND1P03886 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
MT-ND1P03886 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
MT-ND1P03886 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.75■□□□□ 0.75
MT-ND1P03886 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.75■□□□□ 0.75
MT-ND1P03886 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
MT-ND1P03886 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
MT-ND1P03886 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
MT-ND1P03886 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MT-ND1P03886 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
MT-ND1P03886 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MT-ND1P03886 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
MT-ND1P03886 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MT-ND1P03886 AC003102.1-202ENST00000563394 1796 ntBASIC19.75■□□□□ 0.75
MT-ND1P03886 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.75■□□□□ 0.75
MT-ND1P03886 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.74■□□□□ 0.75
MT-ND1P03886 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
MT-ND1P03886 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MT-ND1P03886 AP005212.1-201ENST00000581547 1997 ntBASIC19.74■□□□□ 0.75
MT-ND1P03886 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
MT-ND1P03886 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
MT-ND1P03886 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
MT-ND1P03886 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
MT-ND1P03886 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.74■□□□□ 0.75
MT-ND1P03886 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
MT-ND1P03886 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.74■□□□□ 0.75
MT-ND1P03886 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
MT-ND1P03886 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.74■□□□□ 0.75
MT-ND1P03886 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MT-ND1P03886 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
MT-ND1P03886 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
MT-ND1P03886 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MT-ND1P03886 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.73■□□□□ 0.75
MT-ND1P03886 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
MT-ND1P03886 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
MT-ND1P03886 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.73■□□□□ 0.75
MT-ND1P03886 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.73■□□□□ 0.75
MT-ND1P03886 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
MT-ND1P03886 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
MT-ND1P03886 SRD5A1P1-201ENST00000442297 786 ntBASIC19.73■□□□□ 0.75
MT-ND1P03886 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
MT-ND1P03886 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
MT-ND1P03886 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
MT-ND1P03886 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MT-ND1P03886 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.73■□□□□ 0.75
MT-ND1P03886 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MT-ND1P03886 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.72■□□□□ 0.75
MT-ND1P03886 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
MT-ND1P03886 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
MT-ND1P03886 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MT-ND1P03886 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
MT-ND1P03886 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MT-ND1P03886 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
MT-ND1P03886 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MT-ND1P03886 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MT-ND1P03886 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MT-ND1P03886 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
MT-ND1P03886 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.72■□□□□ 0.75
MT-ND1P03886 AC092171.4-201ENST00000609130 632 ntBASIC19.72■□□□□ 0.75
MT-ND1P03886 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MT-ND1P03886 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MT-ND1P03886 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
MT-ND1P03886 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.72■□□□□ 0.75
MT-ND1P03886 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
MT-ND1P03886 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
MT-ND1P03886 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
MT-ND1P03886 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
MT-ND1P03886 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms