Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
IFNA1P01562 LONRF2P2-201ENST00000439212 571 ntBASIC16.65■□□□□ 0.26
IFNA1P01562 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC16.65■□□□□ 0.26
IFNA1P01562 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
IFNA1P01562 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IFNA1P01562 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC16.65■□□□□ 0.26
IFNA1P01562 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
IFNA1P01562 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IFNA1P01562 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC16.65■□□□□ 0.26
IFNA1P01562 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
IFNA1P01562 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
IFNA1P01562 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IFNA1P01562 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IFNA1P01562 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IFNA1P01562 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IFNA1P01562 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IFNA1P01562 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC16.64■□□□□ 0.25
IFNA1P01562 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
IFNA1P01562 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC16.64■□□□□ 0.25
IFNA1P01562 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC16.64■□□□□ 0.25
IFNA1P01562 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IFNA1P01562 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
IFNA1P01562 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
IFNA1P01562 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
IFNA1P01562 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
IFNA1P01562 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IFNA1P01562 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IFNA1P01562 DYM-203ENST00000442713 2147 ntTSL 2 BASIC16.64■□□□□ 0.25
IFNA1P01562 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IFNA1P01562 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
IFNA1P01562 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC16.64■□□□□ 0.25
IFNA1P01562 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IFNA1P01562 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
IFNA1P01562 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
IFNA1P01562 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.64■□□□□ 0.25
IFNA1P01562 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IFNA1P01562 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IFNA1P01562 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC16.64■□□□□ 0.25
IFNA1P01562 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IFNA1P01562 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
IFNA1P01562 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IFNA1P01562 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC16.64■□□□□ 0.25
IFNA1P01562 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
IFNA1P01562 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
IFNA1P01562 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
IFNA1P01562 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
IFNA1P01562 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
IFNA1P01562 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
IFNA1P01562 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
IFNA1P01562 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
IFNA1P01562 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
IFNA1P01562 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
IFNA1P01562 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.63■□□□□ 0.25
IFNA1P01562 AC022616.5-201ENST00000518796 181 ntBASIC16.63■□□□□ 0.25
IFNA1P01562 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
IFNA1P01562 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC16.63■□□□□ 0.25
IFNA1P01562 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
IFNA1P01562 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
IFNA1P01562 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
IFNA1P01562 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
IFNA1P01562 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC16.62■□□□□ 0.25
IFNA1P01562 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
IFNA1P01562 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
IFNA1P01562 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16.62■□□□□ 0.25
IFNA1P01562 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IFNA1P01562 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IFNA1P01562 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IFNA1P01562 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
IFNA1P01562 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
IFNA1P01562 MIR6765-201ENST00000614092 87 ntBASIC16.62■□□□□ 0.25
IFNA1P01562 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IFNA1P01562 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
IFNA1P01562 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
IFNA1P01562 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC16.62■□□□□ 0.25
IFNA1P01562 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
IFNA1P01562 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
IFNA1P01562 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
IFNA1P01562 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
IFNA1P01562 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFNA1P01562 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFNA1P01562 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.61■□□□□ 0.25
IFNA1P01562 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFNA1P01562 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
IFNA1P01562 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
IFNA1P01562 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.61■□□□□ 0.25
IFNA1P01562 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
IFNA1P01562 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.61■□□□□ 0.25
IFNA1P01562 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
IFNA1P01562 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
IFNA1P01562 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
IFNA1P01562 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
IFNA1P01562 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC16.61■□□□□ 0.25
IFNA1P01562 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFNA1P01562 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
IFNA1P01562 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFNA1P01562 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC16.61■□□□□ 0.25
IFNA1P01562 REST-206ENST00000612429 1376 ntTSL 5 BASIC16.61■□□□□ 0.25
IFNA1P01562 REST-207ENST00000616975 1370 ntTSL 5 BASIC16.61■□□□□ 0.25
IFNA1P01562 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
IFNA1P01562 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms