Protein–RNA interactions for Protein: O95562

SFT2D2, Vesicle transport protein SFT2B, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D2O95562 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SFT2D2O95562 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SFT2D2O95562 AC021242.3-201ENST00000607598 1377 ntBASIC17.42■□□□□ 0.38
SFT2D2O95562 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SFT2D2O95562 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SFT2D2O95562 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SFT2D2O95562 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SFT2D2O95562 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
SFT2D2O95562 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.42■□□□□ 0.38
SFT2D2O95562 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SFT2D2O95562 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SFT2D2O95562 NTF6A-201ENST00000591175 560 ntBASIC17.42■□□□□ 0.38
SFT2D2O95562 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SFT2D2O95562 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SFT2D2O95562 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.42■□□□□ 0.38
SFT2D2O95562 AC003102.1-202ENST00000563394 1796 ntBASIC17.42■□□□□ 0.38
SFT2D2O95562 AC027702.1-201ENST00000563810 1770 ntBASIC17.42■□□□□ 0.38
SFT2D2O95562 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.42■□□□□ 0.38
SFT2D2O95562 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.42■□□□□ 0.38
SFT2D2O95562 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SFT2D2O95562 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC17.42■□□□□ 0.38
SFT2D2O95562 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SFT2D2O95562 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SFT2D2O95562 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
SFT2D2O95562 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SFT2D2O95562 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SFT2D2O95562 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SFT2D2O95562 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SFT2D2O95562 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SFT2D2O95562 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SFT2D2O95562 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SFT2D2O95562 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SFT2D2O95562 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SFT2D2O95562 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SFT2D2O95562 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.41■□□□□ 0.38
SFT2D2O95562 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SFT2D2O95562 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SFT2D2O95562 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SFT2D2O95562 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SFT2D2O95562 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SFT2D2O95562 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SFT2D2O95562 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SFT2D2O95562 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SFT2D2O95562 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SFT2D2O95562 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.4■□□□□ 0.38
SFT2D2O95562 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SFT2D2O95562 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SFT2D2O95562 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SFT2D2O95562 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.4■□□□□ 0.38
SFT2D2O95562 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.4■□□□□ 0.38
SFT2D2O95562 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.4■□□□□ 0.38
SFT2D2O95562 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.4■□□□□ 0.38
SFT2D2O95562 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SFT2D2O95562 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SFT2D2O95562 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SFT2D2O95562 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC17.4■□□□□ 0.38
SFT2D2O95562 AC103724.3-201ENST00000564481 992 ntBASIC17.4■□□□□ 0.38
SFT2D2O95562 AC068587.7-201ENST00000641602 218 ntBASIC17.4■□□□□ 0.38
SFT2D2O95562 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SFT2D2O95562 AC020907.5-201ENST00000624372 1936 ntBASIC17.4■□□□□ 0.38
SFT2D2O95562 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SFT2D2O95562 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.4■□□□□ 0.38
SFT2D2O95562 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.4■□□□□ 0.38
SFT2D2O95562 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.4■□□□□ 0.38
SFT2D2O95562 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SFT2D2O95562 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.39■□□□□ 0.38
SFT2D2O95562 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
SFT2D2O95562 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
SFT2D2O95562 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SFT2D2O95562 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SFT2D2O95562 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SFT2D2O95562 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.39■□□□□ 0.37
SFT2D2O95562 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC17.39■□□□□ 0.37
SFT2D2O95562 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
SFT2D2O95562 AC103834.1-201ENST00000520383 144 ntBASIC17.39■□□□□ 0.37
SFT2D2O95562 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SFT2D2O95562 AL034346.1-201ENST00000568244 1277 ntBASIC17.39■□□□□ 0.37
SFT2D2O95562 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC17.39■□□□□ 0.37
SFT2D2O95562 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SFT2D2O95562 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SFT2D2O95562 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.39■□□□□ 0.37
SFT2D2O95562 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SFT2D2O95562 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SFT2D2O95562 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SFT2D2O95562 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SFT2D2O95562 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.39■□□□□ 0.37
SFT2D2O95562 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
SFT2D2O95562 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SFT2D2O95562 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SFT2D2O95562 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SFT2D2O95562 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SFT2D2O95562 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SFT2D2O95562 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SFT2D2O95562 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.38■□□□□ 0.37
SFT2D2O95562 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.38■□□□□ 0.37
SFT2D2O95562 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SFT2D2O95562 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SFT2D2O95562 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SFT2D2O95562 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
SFT2D2O95562 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms