Protein–RNA interactions for Protein: O95407

TNFRSF6B, Tumor necrosis factor receptor superfamily member 6B, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF6BO95407 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNFRSF6BO95407 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC15.25■□□□□ 0.03
TNFRSF6BO95407 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNFRSF6BO95407 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNFRSF6BO95407 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TNFRSF6BO95407 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNFRSF6BO95407 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNFRSF6BO95407 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNFRSF6BO95407 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNFRSF6BO95407 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNFRSF6BO95407 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC15.24■□□□□ 0.03
TNFRSF6BO95407 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TNFRSF6BO95407 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNFRSF6BO95407 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC15.24■□□□□ 0.03
TNFRSF6BO95407 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TNFRSF6BO95407 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNFRSF6BO95407 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TNFRSF6BO95407 SENP5-202ENST00000419026 973 ntTSL 3 BASIC15.24■□□□□ 0.03
TNFRSF6BO95407 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC15.24■□□□□ 0.03
TNFRSF6BO95407 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TNFRSF6BO95407 PVT1_1.1-201ENST00000615125 194 ntBASIC15.24■□□□□ 0.03
TNFRSF6BO95407 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TNFRSF6BO95407 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNFRSF6BO95407 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC15.24■□□□□ 0.03
TNFRSF6BO95407 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TNFRSF6BO95407 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TNFRSF6BO95407 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC15.24■□□□□ 0.03
TNFRSF6BO95407 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TNFRSF6BO95407 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC15.24■□□□□ 0.03
TNFRSF6BO95407 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNFRSF6BO95407 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNFRSF6BO95407 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC15.24■□□□□ 0.03
TNFRSF6BO95407 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC15.23■□□□□ 0.03
TNFRSF6BO95407 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TNFRSF6BO95407 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TNFRSF6BO95407 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TNFRSF6BO95407 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TNFRSF6BO95407 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
TNFRSF6BO95407 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TNFRSF6BO95407 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TNFRSF6BO95407 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC15.23■□□□□ 0.03
TNFRSF6BO95407 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TNFRSF6BO95407 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC15.23■□□□□ 0.03
TNFRSF6BO95407 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC15.23■□□□□ 0.03
TNFRSF6BO95407 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TNFRSF6BO95407 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TNFRSF6BO95407 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
TNFRSF6BO95407 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
TNFRSF6BO95407 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC15.23■□□□□ 0.03
TNFRSF6BO95407 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TNFRSF6BO95407 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TNFRSF6BO95407 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
TNFRSF6BO95407 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TNFRSF6BO95407 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFRSF6BO95407 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFRSF6BO95407 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TNFRSF6BO95407 AC009102.2-201ENST00000606772 1639 ntBASIC15.22■□□□□ 0.03
TNFRSF6BO95407 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TNFRSF6BO95407 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFRSF6BO95407 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TNFRSF6BO95407 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TNFRSF6BO95407 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC15.22■□□□□ 0.03
TNFRSF6BO95407 AL031602.1-201ENST00000633169 911 ntBASIC15.22■□□□□ 0.03
TNFRSF6BO95407 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFRSF6BO95407 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFRSF6BO95407 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TNFRSF6BO95407 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFRSF6BO95407 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TNFRSF6BO95407 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFRSF6BO95407 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC15.22■□□□□ 0.03
TNFRSF6BO95407 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFRSF6BO95407 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TNFRSF6BO95407 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
TNFRSF6BO95407 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TNFRSF6BO95407 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC15.21■□□□□ 0.03
TNFRSF6BO95407 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
TNFRSF6BO95407 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TNFRSF6BO95407 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC15.21■□□□□ 0.03
TNFRSF6BO95407 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TNFRSF6BO95407 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC15.21■□□□□ 0.03
TNFRSF6BO95407 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
TNFRSF6BO95407 RARRES2P2-201ENST00000394842 485 ntBASIC15.21■□□□□ 0.03
TNFRSF6BO95407 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TNFRSF6BO95407 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC15.21■□□□□ 0.03
TNFRSF6BO95407 CLTA-210ENST00000540080 989 ntTSL 2 BASIC15.21■□□□□ 0.03
TNFRSF6BO95407 AL499627.2-201ENST00000606283 725 ntBASIC15.21■□□□□ 0.03
TNFRSF6BO95407 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TNFRSF6BO95407 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC15.21■□□□□ 0.03
TNFRSF6BO95407 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC15.21■□□□□ 0.03
TNFRSF6BO95407 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
TNFRSF6BO95407 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
TNFRSF6BO95407 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.02
TNFRSF6BO95407 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TNFRSF6BO95407 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC15.2■□□□□ 0.02
TNFRSF6BO95407 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TNFRSF6BO95407 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TNFRSF6BO95407 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC15.2■□□□□ 0.02
TNFRSF6BO95407 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC15.2■□□□□ 0.02
TNFRSF6BO95407 BEX3-202ENST00000372634 753 ntTSL 2 BASIC15.2■□□□□ 0.02
TNFRSF6BO95407 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms