Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.12■□□□□ 0.33
SCAF4O95104 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SCAF4O95104 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
SCAF4O95104 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCAF4O95104 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SCAF4O95104 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SCAF4O95104 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCAF4O95104 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.12■□□□□ 0.33
SCAF4O95104 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.12■□□□□ 0.33
SCAF4O95104 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SCAF4O95104 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SCAF4O95104 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCAF4O95104 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
SCAF4O95104 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
SCAF4O95104 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SCAF4O95104 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCAF4O95104 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SCAF4O95104 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.11■□□□□ 0.33
SCAF4O95104 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCAF4O95104 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.11■□□□□ 0.33
SCAF4O95104 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC17.11■□□□□ 0.33
SCAF4O95104 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCAF4O95104 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.11■□□□□ 0.33
SCAF4O95104 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC17.11■□□□□ 0.33
SCAF4O95104 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC17.11■□□□□ 0.33
SCAF4O95104 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCAF4O95104 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SCAF4O95104 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.11■□□□□ 0.33
SCAF4O95104 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCAF4O95104 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
SCAF4O95104 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.1■□□□□ 0.33
SCAF4O95104 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.1■□□□□ 0.33
SCAF4O95104 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.1■□□□□ 0.33
SCAF4O95104 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SCAF4O95104 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC17.1■□□□□ 0.33
SCAF4O95104 AC079089.2-201ENST00000531211 1277 ntBASIC17.1■□□□□ 0.33
SCAF4O95104 MIR3621-201ENST00000580529 85 ntBASIC17.1■□□□□ 0.33
SCAF4O95104 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC17.1■□□□□ 0.33
SCAF4O95104 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCAF4O95104 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.1■□□□□ 0.33
SCAF4O95104 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCAF4O95104 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.1■□□□□ 0.33
SCAF4O95104 C17orf82-201ENST00000623772 1530 ntBASIC17.1■□□□□ 0.33
SCAF4O95104 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SCAF4O95104 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.1■□□□□ 0.33
SCAF4O95104 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.1■□□□□ 0.33
SCAF4O95104 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.1■□□□□ 0.33
SCAF4O95104 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SCAF4O95104 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SCAF4O95104 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SCAF4O95104 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.09■□□□□ 0.33
SCAF4O95104 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.09■□□□□ 0.33
SCAF4O95104 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCAF4O95104 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC17.09■□□□□ 0.33
SCAF4O95104 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.09■□□□□ 0.33
SCAF4O95104 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC17.09■□□□□ 0.33
SCAF4O95104 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.09■□□□□ 0.33
SCAF4O95104 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC17.09■□□□□ 0.33
SCAF4O95104 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCAF4O95104 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCAF4O95104 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCAF4O95104 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SCAF4O95104 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SCAF4O95104 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.09■□□□□ 0.33
SCAF4O95104 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.09■□□□□ 0.33
SCAF4O95104 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.09■□□□□ 0.33
SCAF4O95104 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCAF4O95104 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SCAF4O95104 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SCAF4O95104 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SCAF4O95104 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SCAF4O95104 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SCAF4O95104 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCAF4O95104 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.08■□□□□ 0.32
SCAF4O95104 AC008406.3-201ENST00000620001 1374 ntBASIC17.08■□□□□ 0.32
SCAF4O95104 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC17.08■□□□□ 0.32
SCAF4O95104 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC17.08■□□□□ 0.32
SCAF4O95104 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
SCAF4O95104 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
SCAF4O95104 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC17.08■□□□□ 0.32
SCAF4O95104 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCAF4O95104 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.08■□□□□ 0.32
SCAF4O95104 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCAF4O95104 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SCAF4O95104 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCAF4O95104 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.08■□□□□ 0.32
SCAF4O95104 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.07■□□□□ 0.32
SCAF4O95104 AC009102.2-201ENST00000606772 1639 ntBASIC17.07■□□□□ 0.32
SCAF4O95104 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCAF4O95104 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCAF4O95104 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCAF4O95104 OR7E47P-201ENST00000546390 1422 ntBASIC17.07■□□□□ 0.32
SCAF4O95104 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCAF4O95104 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCAF4O95104 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SCAF4O95104 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCAF4O95104 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC17.07■□□□□ 0.32
SCAF4O95104 AL499627.2-201ENST00000606283 725 ntBASIC17.07■□□□□ 0.32
SCAF4O95104 AC068587.7-201ENST00000641602 218 ntBASIC17.07■□□□□ 0.32
SCAF4O95104 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms