Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KDM4BO94953 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KDM4BO94953 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
KDM4BO94953 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.37■□□□□ 0.53
KDM4BO94953 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.37■□□□□ 0.53
KDM4BO94953 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
KDM4BO94953 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KDM4BO94953 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.37■□□□□ 0.53
KDM4BO94953 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KDM4BO94953 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
KDM4BO94953 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
KDM4BO94953 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
KDM4BO94953 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.37■□□□□ 0.53
KDM4BO94953 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KDM4BO94953 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KDM4BO94953 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KDM4BO94953 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.37■□□□□ 0.53
KDM4BO94953 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.37■□□□□ 0.53
KDM4BO94953 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.37■□□□□ 0.53
KDM4BO94953 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.37■□□□□ 0.53
KDM4BO94953 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KDM4BO94953 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
KDM4BO94953 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KDM4BO94953 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KDM4BO94953 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KDM4BO94953 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KDM4BO94953 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.36■□□□□ 0.53
KDM4BO94953 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
KDM4BO94953 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KDM4BO94953 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KDM4BO94953 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.36■□□□□ 0.53
KDM4BO94953 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
KDM4BO94953 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.36■□□□□ 0.53
KDM4BO94953 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KDM4BO94953 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.36■□□□□ 0.53
KDM4BO94953 OR7E47P-201ENST00000546390 1422 ntBASIC18.36■□□□□ 0.53
KDM4BO94953 AL138724.1-201ENST00000606771 1088 ntBASIC18.36■□□□□ 0.53
KDM4BO94953 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.36■□□□□ 0.53
KDM4BO94953 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KDM4BO94953 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
KDM4BO94953 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
KDM4BO94953 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
KDM4BO94953 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KDM4BO94953 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KDM4BO94953 LINC01006-201ENST00000333319 2292 ntBASIC18.35■□□□□ 0.53
KDM4BO94953 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KDM4BO94953 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KDM4BO94953 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KDM4BO94953 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
KDM4BO94953 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KDM4BO94953 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.35■□□□□ 0.53
KDM4BO94953 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
KDM4BO94953 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.35■□□□□ 0.53
KDM4BO94953 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.35■□□□□ 0.53
KDM4BO94953 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KDM4BO94953 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KDM4BO94953 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
KDM4BO94953 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
KDM4BO94953 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KDM4BO94953 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KDM4BO94953 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KDM4BO94953 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KDM4BO94953 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KDM4BO94953 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
KDM4BO94953 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KDM4BO94953 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KDM4BO94953 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
KDM4BO94953 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KDM4BO94953 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KDM4BO94953 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KDM4BO94953 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.34■□□□□ 0.53
KDM4BO94953 DUX4L19-201ENST00000557448 1267 ntBASIC18.34■□□□□ 0.53
KDM4BO94953 AC087239.1-201ENST00000622671 572 ntBASIC18.34■□□□□ 0.53
KDM4BO94953 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
KDM4BO94953 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KDM4BO94953 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
KDM4BO94953 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KDM4BO94953 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.34■□□□□ 0.53
KDM4BO94953 AC007952.6-201ENST00000573168 2673 ntBASIC18.34■□□□□ 0.53
KDM4BO94953 AC003957.1-201ENST00000625108 2673 ntBASIC18.34■□□□□ 0.53
KDM4BO94953 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KDM4BO94953 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.33■□□□□ 0.53
KDM4BO94953 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KDM4BO94953 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KDM4BO94953 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
KDM4BO94953 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
KDM4BO94953 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KDM4BO94953 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.33■□□□□ 0.53
KDM4BO94953 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
KDM4BO94953 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.33■□□□□ 0.52
KDM4BO94953 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
KDM4BO94953 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.33■□□□□ 0.52
KDM4BO94953 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.33■□□□□ 0.52
KDM4BO94953 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.33■□□□□ 0.52
KDM4BO94953 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
KDM4BO94953 AC104564.3-201ENST00000582367 638 ntBASIC18.33■□□□□ 0.52
KDM4BO94953 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.33■□□□□ 0.52
KDM4BO94953 MIR4466-201ENST00000606121 54 ntBASIC18.33■□□□□ 0.52
KDM4BO94953 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.33■□□□□ 0.52
KDM4BO94953 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms