Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM3O75382 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM3O75382 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
TRIM3O75382 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM3O75382 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM3O75382 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.53■□□□□ 0.72
TRIM3O75382 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM3O75382 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.53■□□□□ 0.72
TRIM3O75382 AC073130.3-201ENST00000624389 2278 ntBASIC19.53■□□□□ 0.72
TRIM3O75382 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM3O75382 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.53■□□□□ 0.72
TRIM3O75382 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.53■□□□□ 0.72
TRIM3O75382 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.53■□□□□ 0.72
TRIM3O75382 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM3O75382 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM3O75382 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.53■□□□□ 0.72
TRIM3O75382 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
TRIM3O75382 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.53■□□□□ 0.72
TRIM3O75382 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM3O75382 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.53■□□□□ 0.72
TRIM3O75382 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
TRIM3O75382 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM3O75382 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM3O75382 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.52■□□□□ 0.72
TRIM3O75382 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.52■□□□□ 0.72
TRIM3O75382 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM3O75382 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.52■□□□□ 0.72
TRIM3O75382 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM3O75382 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.52■□□□□ 0.72
TRIM3O75382 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM3O75382 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM3O75382 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM3O75382 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.52■□□□□ 0.72
TRIM3O75382 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.52■□□□□ 0.72
TRIM3O75382 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM3O75382 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.52■□□□□ 0.72
TRIM3O75382 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.52■□□□□ 0.72
TRIM3O75382 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM3O75382 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TRIM3O75382 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.52■□□□□ 0.71
TRIM3O75382 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
TRIM3O75382 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
TRIM3O75382 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.52■□□□□ 0.71
TRIM3O75382 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
TRIM3O75382 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
TRIM3O75382 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.51■□□□□ 0.71
TRIM3O75382 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM3O75382 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM3O75382 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
TRIM3O75382 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.51■□□□□ 0.71
TRIM3O75382 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.51■□□□□ 0.71
TRIM3O75382 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM3O75382 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM3O75382 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.51■□□□□ 0.71
TRIM3O75382 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM3O75382 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.51■□□□□ 0.71
TRIM3O75382 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM3O75382 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM3O75382 AP006587.3-201ENST00000525742 1516 ntBASIC19.51■□□□□ 0.71
TRIM3O75382 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM3O75382 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM3O75382 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM3O75382 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.5■□□□□ 0.71
TRIM3O75382 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM3O75382 KRT87P-202ENST00000534226 1464 ntBASIC19.5■□□□□ 0.71
TRIM3O75382 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM3O75382 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM3O75382 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM3O75382 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM3O75382 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.5■□□□□ 0.71
TRIM3O75382 IKBKGP1-201ENST00000612193 1073 ntBASIC19.5■□□□□ 0.71
TRIM3O75382 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM3O75382 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM3O75382 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM3O75382 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM3O75382 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM3O75382 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM3O75382 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM3O75382 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.5■□□□□ 0.71
TRIM3O75382 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM3O75382 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM3O75382 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.5■□□□□ 0.71
TRIM3O75382 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TRIM3O75382 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM3O75382 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM3O75382 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TRIM3O75382 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TRIM3O75382 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
TRIM3O75382 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
TRIM3O75382 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM3O75382 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM3O75382 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
TRIM3O75382 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM3O75382 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.49■□□□□ 0.71
TRIM3O75382 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM3O75382 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.49■□□□□ 0.71
TRIM3O75382 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.49■□□□□ 0.71
TRIM3O75382 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.49■□□□□ 0.71
TRIM3O75382 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.49■□□□□ 0.71
TRIM3O75382 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms