Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.22■□□□□ 0.99
CDH16O75309 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDH16O75309 MIR3181-201ENST00000578512 73 ntBASIC21.22■□□□□ 0.99
CDH16O75309 AC007952.6-201ENST00000573168 2673 ntBASIC21.22■□□□□ 0.99
CDH16O75309 AC003957.1-201ENST00000625108 2673 ntBASIC21.22■□□□□ 0.99
CDH16O75309 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.22■□□□□ 0.99
CDH16O75309 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
CDH16O75309 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDH16O75309 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDH16O75309 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDH16O75309 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.22■□□□□ 0.99
CDH16O75309 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CDH16O75309 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDH16O75309 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDH16O75309 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.21■□□□□ 0.99
CDH16O75309 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDH16O75309 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CDH16O75309 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CDH16O75309 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.21■□□□□ 0.99
CDH16O75309 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CDH16O75309 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDH16O75309 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDH16O75309 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDH16O75309 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CDH16O75309 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDH16O75309 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDH16O75309 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.2■□□□□ 0.99
CDH16O75309 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDH16O75309 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDH16O75309 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDH16O75309 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.2■□□□□ 0.98
CDH16O75309 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.2■□□□□ 0.98
CDH16O75309 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDH16O75309 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.2■□□□□ 0.98
CDH16O75309 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
CDH16O75309 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
CDH16O75309 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDH16O75309 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH16O75309 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CDH16O75309 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDH16O75309 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH16O75309 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH16O75309 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH16O75309 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.19■□□□□ 0.98
CDH16O75309 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.19■□□□□ 0.98
CDH16O75309 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.19■□□□□ 0.98
CDH16O75309 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.19■□□□□ 0.98
CDH16O75309 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.19■□□□□ 0.98
CDH16O75309 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CDH16O75309 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH16O75309 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH16O75309 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDH16O75309 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
CDH16O75309 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH16O75309 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH16O75309 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.19■□□□□ 0.98
CDH16O75309 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.19■□□□□ 0.98
CDH16O75309 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH16O75309 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH16O75309 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDH16O75309 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDH16O75309 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CDH16O75309 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDH16O75309 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
CDH16O75309 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.18■□□□□ 0.98
CDH16O75309 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDH16O75309 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CDH16O75309 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDH16O75309 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CDH16O75309 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDH16O75309 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.18■□□□□ 0.98
CDH16O75309 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.18■□□□□ 0.98
CDH16O75309 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.18■□□□□ 0.98
CDH16O75309 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.18■□□□□ 0.98
CDH16O75309 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDH16O75309 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDH16O75309 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CDH16O75309 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDH16O75309 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.17■□□□□ 0.98
CDH16O75309 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDH16O75309 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDH16O75309 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.17■□□□□ 0.98
CDH16O75309 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.17■□□□□ 0.98
CDH16O75309 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.17■□□□□ 0.98
CDH16O75309 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDH16O75309 AP006587.3-201ENST00000525742 1516 ntBASIC21.17■□□□□ 0.98
CDH16O75309 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CDH16O75309 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.17■□□□□ 0.98
CDH16O75309 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.17■□□□□ 0.98
CDH16O75309 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
CDH16O75309 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDH16O75309 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDH16O75309 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.16■□□□□ 0.98
CDH16O75309 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDH16O75309 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDH16O75309 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDH16O75309 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDH16O75309 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.16■□□□□ 0.98
CDH16O75309 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.16■□□□□ 0.98
CDH16O75309 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms