Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RIPK2O43353 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
RIPK2O43353 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RIPK2O43353 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
RIPK2O43353 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
RIPK2O43353 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RIPK2O43353 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RIPK2O43353 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.37■■□□□ 1.01
RIPK2O43353 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.37■■□□□ 1.01
RIPK2O43353 AC027702.1-201ENST00000563810 1770 ntBASIC21.37■■□□□ 1.01
RIPK2O43353 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.37■■□□□ 1.01
RIPK2O43353 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.37■■□□□ 1.01
RIPK2O43353 AFG3L1P-217ENST00000557444 2447 ntBASIC21.37■■□□□ 1.01
RIPK2O43353 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RIPK2O43353 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
RIPK2O43353 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RIPK2O43353 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.36■■□□□ 1.01
RIPK2O43353 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.36■■□□□ 1.01
RIPK2O43353 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RIPK2O43353 AP006587.3-201ENST00000525742 1516 ntBASIC21.36■■□□□ 1.01
RIPK2O43353 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.36■■□□□ 1.01
RIPK2O43353 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
RIPK2O43353 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
RIPK2O43353 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
RIPK2O43353 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.36■■□□□ 1.01
RIPK2O43353 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
RIPK2O43353 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
RIPK2O43353 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.36■■□□□ 1.01
RIPK2O43353 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.36■■□□□ 1.01
RIPK2O43353 PCDHAC2-203ENST00000615316 3011 ntBASIC21.36■■□□□ 1.01
RIPK2O43353 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
RIPK2O43353 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RIPK2O43353 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.35■■□□□ 1.01
RIPK2O43353 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
RIPK2O43353 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
RIPK2O43353 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.35■■□□□ 1.01
RIPK2O43353 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RIPK2O43353 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RIPK2O43353 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.35■■□□□ 1.01
RIPK2O43353 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RIPK2O43353 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RIPK2O43353 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RIPK2O43353 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
RIPK2O43353 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RIPK2O43353 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
RIPK2O43353 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RIPK2O43353 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RIPK2O43353 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
RIPK2O43353 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RIPK2O43353 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
RIPK2O43353 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RIPK2O43353 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.34■■□□□ 1.01
RIPK2O43353 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.34■■□□□ 1.01
RIPK2O43353 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.34■■□□□ 1.01
RIPK2O43353 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RIPK2O43353 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RIPK2O43353 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.34■■□□□ 1.01
RIPK2O43353 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
RIPK2O43353 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RIPK2O43353 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RIPK2O43353 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.34■■□□□ 1.01
RIPK2O43353 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RIPK2O43353 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RIPK2O43353 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RIPK2O43353 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.33■■□□□ 1.01
RIPK2O43353 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.33■■□□□ 1.01
RIPK2O43353 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.33■■□□□ 1.01
RIPK2O43353 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RIPK2O43353 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.33■■□□□ 1.01
RIPK2O43353 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
RIPK2O43353 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.33■■□□□ 1
RIPK2O43353 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RIPK2O43353 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
RIPK2O43353 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
RIPK2O43353 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RIPK2O43353 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1
RIPK2O43353 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
RIPK2O43353 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RIPK2O43353 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
RIPK2O43353 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.32■■□□□ 1
RIPK2O43353 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RIPK2O43353 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
RIPK2O43353 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
RIPK2O43353 AC009299.2-201ENST00000482477 511 ntBASIC21.32■■□□□ 1
RIPK2O43353 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RIPK2O43353 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
RIPK2O43353 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.31■■□□□ 1
RIPK2O43353 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.31■■□□□ 1
RIPK2O43353 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RIPK2O43353 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.31■■□□□ 1
RIPK2O43353 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.31■■□□□ 1
RIPK2O43353 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.31■■□□□ 1
RIPK2O43353 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RIPK2O43353 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.31■■□□□ 1
RIPK2O43353 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.31■■□□□ 1
RIPK2O43353 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.31■■□□□ 1
RIPK2O43353 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RIPK2O43353 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.3■■□□□ 1
RIPK2O43353 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
RIPK2O43353 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms