Protein–RNA interactions for Protein: O43325

LYRM1, LYR motif-containing protein 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1O43325 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
LYRM1O43325 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LYRM1O43325 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.09■□□□□ 0.49
LYRM1O43325 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LYRM1O43325 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LYRM1O43325 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LYRM1O43325 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.09■□□□□ 0.49
LYRM1O43325 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LYRM1O43325 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LYRM1O43325 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
LYRM1O43325 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
LYRM1O43325 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
LYRM1O43325 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LYRM1O43325 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.08■□□□□ 0.49
LYRM1O43325 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
LYRM1O43325 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.08■□□□□ 0.49
LYRM1O43325 AC020907.5-201ENST00000624372 1936 ntBASIC18.08■□□□□ 0.49
LYRM1O43325 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LYRM1O43325 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
LYRM1O43325 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LYRM1O43325 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LYRM1O43325 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
LYRM1O43325 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC18.08■□□□□ 0.48
LYRM1O43325 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LYRM1O43325 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LYRM1O43325 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LYRM1O43325 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
LYRM1O43325 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.08■□□□□ 0.48
LYRM1O43325 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LYRM1O43325 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LYRM1O43325 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.08■□□□□ 0.48
LYRM1O43325 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LYRM1O43325 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LYRM1O43325 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LYRM1O43325 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LYRM1O43325 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LYRM1O43325 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
LYRM1O43325 MIR6765-201ENST00000614092 87 ntBASIC18.07■□□□□ 0.48
LYRM1O43325 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LYRM1O43325 PLK5-205ENST00000642079 1969 ntBASIC18.07■□□□□ 0.48
LYRM1O43325 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LYRM1O43325 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LYRM1O43325 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.07■□□□□ 0.48
LYRM1O43325 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
LYRM1O43325 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LYRM1O43325 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LYRM1O43325 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
LYRM1O43325 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LYRM1O43325 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LYRM1O43325 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
LYRM1O43325 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LYRM1O43325 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.06■□□□□ 0.48
LYRM1O43325 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LYRM1O43325 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
LYRM1O43325 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LYRM1O43325 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LYRM1O43325 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LYRM1O43325 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LYRM1O43325 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LYRM1O43325 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LYRM1O43325 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LYRM1O43325 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
LYRM1O43325 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC18.06■□□□□ 0.48
LYRM1O43325 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.06■□□□□ 0.48
LYRM1O43325 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LYRM1O43325 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LYRM1O43325 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
LYRM1O43325 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.06■□□□□ 0.48
LYRM1O43325 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LYRM1O43325 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
LYRM1O43325 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LYRM1O43325 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.05■□□□□ 0.48
LYRM1O43325 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.05■□□□□ 0.48
LYRM1O43325 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LYRM1O43325 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LYRM1O43325 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LYRM1O43325 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LYRM1O43325 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LYRM1O43325 HES4-202ENST00000428771 1040 ntTSL 2 BASIC18.05■□□□□ 0.48
LYRM1O43325 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.05■□□□□ 0.48
LYRM1O43325 SRP68-213ENST00000629930 165 ntTSL 5 BASIC18.05■□□□□ 0.48
LYRM1O43325 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC18.05■□□□□ 0.48
LYRM1O43325 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
LYRM1O43325 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.05■□□□□ 0.48
LYRM1O43325 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
LYRM1O43325 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LYRM1O43325 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LYRM1O43325 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.05■□□□□ 0.48
LYRM1O43325 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LYRM1O43325 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LYRM1O43325 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.05■□□□□ 0.48
LYRM1O43325 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LYRM1O43325 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.05■□□□□ 0.48
LYRM1O43325 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
LYRM1O43325 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LYRM1O43325 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.04■□□□□ 0.48
LYRM1O43325 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LYRM1O43325 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
LYRM1O43325 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.04■□□□□ 0.48
LYRM1O43325 AC116562.4-201ENST00000641316 2276 ntBASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms