Protein–RNA interactions for Protein: O00453

LST1, Leukocyte-specific transcript 1 protein, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LST1O00453 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LST1O00453 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LST1O00453 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LST1O00453 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC13.69□□□□□ -0.22
LST1O00453 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
LST1O00453 C17orf82-201ENST00000623772 1530 ntBASIC13.69□□□□□ -0.22
LST1O00453 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC13.69□□□□□ -0.22
LST1O00453 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LST1O00453 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LST1O00453 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
LST1O00453 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
LST1O00453 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LST1O00453 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LST1O00453 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LST1O00453 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LST1O00453 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LST1O00453 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LST1O00453 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LST1O00453 USP39-204ENST00000409766 2033 ntTSL 2 BASIC13.68□□□□□ -0.22
LST1O00453 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
LST1O00453 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC13.68□□□□□ -0.22
LST1O00453 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
LST1O00453 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LST1O00453 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LST1O00453 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LST1O00453 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
LST1O00453 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC13.68□□□□□ -0.22
LST1O00453 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC13.68□□□□□ -0.22
LST1O00453 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LST1O00453 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LST1O00453 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC13.68□□□□□ -0.22
LST1O00453 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LST1O00453 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC13.68□□□□□ -0.22
LST1O00453 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LST1O00453 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LST1O00453 AC112907.3-201ENST00000577781 2400 ntBASIC13.68□□□□□ -0.22
LST1O00453 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LST1O00453 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
LST1O00453 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LST1O00453 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC13.67□□□□□ -0.22
LST1O00453 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
LST1O00453 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LST1O00453 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LST1O00453 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LST1O00453 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LST1O00453 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LST1O00453 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC13.67□□□□□ -0.22
LST1O00453 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LST1O00453 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC13.67□□□□□ -0.22
LST1O00453 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LST1O00453 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
LST1O00453 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC13.67□□□□□ -0.22
LST1O00453 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LST1O00453 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
LST1O00453 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LST1O00453 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LST1O00453 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC13.67□□□□□ -0.22
LST1O00453 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LST1O00453 SMPD5-203ENST00000639008 1464 ntBASIC13.67□□□□□ -0.22
LST1O00453 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC13.67□□□□□ -0.22
LST1O00453 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LST1O00453 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LST1O00453 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LST1O00453 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LST1O00453 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LST1O00453 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC13.66□□□□□ -0.22
LST1O00453 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC13.66□□□□□ -0.22
LST1O00453 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC13.66□□□□□ -0.22
LST1O00453 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC13.66□□□□□ -0.22
LST1O00453 RNF166-209ENST00000567844 633 ntTSL 5 BASIC13.66□□□□□ -0.22
LST1O00453 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LST1O00453 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LST1O00453 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
LST1O00453 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LST1O00453 PODN-203ENST00000395871 2744 ntTSL 5 BASIC13.66□□□□□ -0.22
LST1O00453 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LST1O00453 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LST1O00453 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LST1O00453 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LST1O00453 AC027702.1-201ENST00000563810 1770 ntBASIC13.66□□□□□ -0.22
LST1O00453 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LST1O00453 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC13.65□□□□□ -0.22
LST1O00453 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LST1O00453 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LST1O00453 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC13.65□□□□□ -0.22
LST1O00453 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LST1O00453 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
LST1O00453 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LST1O00453 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LST1O00453 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LST1O00453 AC020907.5-201ENST00000624372 1936 ntBASIC13.65□□□□□ -0.22
LST1O00453 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LST1O00453 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LST1O00453 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC13.65□□□□□ -0.22
LST1O00453 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LST1O00453 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LST1O00453 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LST1O00453 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LST1O00453 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LST1O00453 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms