Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CFAP99D6REC4 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CFAP99D6REC4 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CFAP99D6REC4 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CFAP99D6REC4 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.93■□□□□ 0.94
CFAP99D6REC4 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CFAP99D6REC4 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CFAP99D6REC4 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CFAP99D6REC4 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.92■□□□□ 0.94
CFAP99D6REC4 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CFAP99D6REC4 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CFAP99D6REC4 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CFAP99D6REC4 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CFAP99D6REC4 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CFAP99D6REC4 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.92■□□□□ 0.94
CFAP99D6REC4 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CFAP99D6REC4 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.92■□□□□ 0.94
CFAP99D6REC4 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.92■□□□□ 0.94
CFAP99D6REC4 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CFAP99D6REC4 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CFAP99D6REC4 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CFAP99D6REC4 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CFAP99D6REC4 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.92■□□□□ 0.94
CFAP99D6REC4 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CFAP99D6REC4 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CFAP99D6REC4 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CFAP99D6REC4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CFAP99D6REC4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CFAP99D6REC4 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CFAP99D6REC4 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CFAP99D6REC4 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CFAP99D6REC4 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.91■□□□□ 0.94
CFAP99D6REC4 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.91■□□□□ 0.94
CFAP99D6REC4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.91■□□□□ 0.94
CFAP99D6REC4 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.91■□□□□ 0.94
CFAP99D6REC4 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CFAP99D6REC4 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.91■□□□□ 0.94
CFAP99D6REC4 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CFAP99D6REC4 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
CFAP99D6REC4 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.9■□□□□ 0.94
CFAP99D6REC4 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.9■□□□□ 0.94
CFAP99D6REC4 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.9■□□□□ 0.94
CFAP99D6REC4 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CFAP99D6REC4 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CFAP99D6REC4 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CFAP99D6REC4 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CFAP99D6REC4 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.9■□□□□ 0.94
CFAP99D6REC4 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CFAP99D6REC4 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
CFAP99D6REC4 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.9■□□□□ 0.94
CFAP99D6REC4 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.9■□□□□ 0.94
CFAP99D6REC4 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CFAP99D6REC4 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CFAP99D6REC4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CFAP99D6REC4 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CFAP99D6REC4 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
CFAP99D6REC4 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CFAP99D6REC4 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CFAP99D6REC4 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CFAP99D6REC4 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CFAP99D6REC4 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.89■□□□□ 0.93
CFAP99D6REC4 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.89■□□□□ 0.93
CFAP99D6REC4 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.89■□□□□ 0.93
CFAP99D6REC4 NTF6G-201ENST00000591094 616 ntBASIC20.89■□□□□ 0.93
CFAP99D6REC4 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CFAP99D6REC4 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.89■□□□□ 0.93
CFAP99D6REC4 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.89■□□□□ 0.93
CFAP99D6REC4 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CFAP99D6REC4 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CFAP99D6REC4 AL121603.2-201ENST00000557373 2117 ntBASIC20.89■□□□□ 0.93
CFAP99D6REC4 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
CFAP99D6REC4 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CFAP99D6REC4 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CFAP99D6REC4 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CFAP99D6REC4 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CFAP99D6REC4 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CFAP99D6REC4 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CFAP99D6REC4 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CFAP99D6REC4 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.88■□□□□ 0.93
CFAP99D6REC4 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CFAP99D6REC4 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
CFAP99D6REC4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
CFAP99D6REC4 KRT19P1-201ENST00000405746 1186 ntBASIC20.88■□□□□ 0.93
CFAP99D6REC4 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.88■□□□□ 0.93
CFAP99D6REC4 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.88■□□□□ 0.93
CFAP99D6REC4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.88■□□□□ 0.93
CFAP99D6REC4 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.88■□□□□ 0.93
CFAP99D6REC4 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CFAP99D6REC4 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.88■□□□□ 0.93
CFAP99D6REC4 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CFAP99D6REC4 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CFAP99D6REC4 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CFAP99D6REC4 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CFAP99D6REC4 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CFAP99D6REC4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.87■□□□□ 0.93
CFAP99D6REC4 AC004854.2-201ENST00000608450 1441 ntBASIC20.87■□□□□ 0.93
CFAP99D6REC4 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CFAP99D6REC4 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CFAP99D6REC4 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.87■□□□□ 0.93
CFAP99D6REC4 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms