Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.69■■□□□ 1.06
SRRM3A6NNA2 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SRRM3A6NNA2 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SRRM3A6NNA2 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
SRRM3A6NNA2 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
SRRM3A6NNA2 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
SRRM3A6NNA2 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.69■■□□□ 1.06
SRRM3A6NNA2 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.69■■□□□ 1.06
SRRM3A6NNA2 AL358852.1-201ENST00000623174 1268 ntBASIC21.69■■□□□ 1.06
SRRM3A6NNA2 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
SRRM3A6NNA2 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SRRM3A6NNA2 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
SRRM3A6NNA2 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SRRM3A6NNA2 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SRRM3A6NNA2 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.69■■□□□ 1.06
SRRM3A6NNA2 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SRRM3A6NNA2 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.69■■□□□ 1.06
SRRM3A6NNA2 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SRRM3A6NNA2 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.68■■□□□ 1.06
SRRM3A6NNA2 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
SRRM3A6NNA2 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.68■■□□□ 1.06
SRRM3A6NNA2 RAP2CP1-201ENST00000605103 478 ntBASIC21.68■■□□□ 1.06
SRRM3A6NNA2 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SRRM3A6NNA2 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.68■■□□□ 1.06
SRRM3A6NNA2 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SRRM3A6NNA2 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.68■■□□□ 1.06
SRRM3A6NNA2 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.68■■□□□ 1.06
SRRM3A6NNA2 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
SRRM3A6NNA2 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.68■■□□□ 1.06
SRRM3A6NNA2 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SRRM3A6NNA2 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.67■■□□□ 1.06
SRRM3A6NNA2 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.67■■□□□ 1.06
SRRM3A6NNA2 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SRRM3A6NNA2 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.67■■□□□ 1.06
SRRM3A6NNA2 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
SRRM3A6NNA2 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SRRM3A6NNA2 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SRRM3A6NNA2 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.67■■□□□ 1.06
SRRM3A6NNA2 AL355802.2-201ENST00000402069 882 ntBASIC21.67■■□□□ 1.06
SRRM3A6NNA2 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SRRM3A6NNA2 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SRRM3A6NNA2 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SRRM3A6NNA2 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.67■■□□□ 1.06
SRRM3A6NNA2 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.67■■□□□ 1.06
SRRM3A6NNA2 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SRRM3A6NNA2 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
SRRM3A6NNA2 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.67■■□□□ 1.06
SRRM3A6NNA2 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SRRM3A6NNA2 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SRRM3A6NNA2 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SRRM3A6NNA2 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SRRM3A6NNA2 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SRRM3A6NNA2 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SRRM3A6NNA2 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
SRRM3A6NNA2 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SRRM3A6NNA2 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SRRM3A6NNA2 AC126544.1-201ENST00000580842 1059 ntBASIC21.66■■□□□ 1.06
SRRM3A6NNA2 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.66■■□□□ 1.06
SRRM3A6NNA2 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SRRM3A6NNA2 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
SRRM3A6NNA2 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SRRM3A6NNA2 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.65■■□□□ 1.06
SRRM3A6NNA2 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
SRRM3A6NNA2 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.65■■□□□ 1.06
SRRM3A6NNA2 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SRRM3A6NNA2 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SRRM3A6NNA2 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SRRM3A6NNA2 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SRRM3A6NNA2 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SRRM3A6NNA2 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SRRM3A6NNA2 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
SRRM3A6NNA2 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.65■■□□□ 1.06
SRRM3A6NNA2 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SRRM3A6NNA2 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
SRRM3A6NNA2 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SRRM3A6NNA2 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
SRRM3A6NNA2 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.65■■□□□ 1.06
SRRM3A6NNA2 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.64■■□□□ 1.06
SRRM3A6NNA2 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SRRM3A6NNA2 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.64■■□□□ 1.06
SRRM3A6NNA2 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SRRM3A6NNA2 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SRRM3A6NNA2 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SRRM3A6NNA2 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
SRRM3A6NNA2 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SRRM3A6NNA2 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SRRM3A6NNA2 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.64■■□□□ 1.05
SRRM3A6NNA2 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.64■■□□□ 1.05
SRRM3A6NNA2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.64■■□□□ 1.05
SRRM3A6NNA2 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SRRM3A6NNA2 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SRRM3A6NNA2 GABARAPL3-202ENST00000624044 1851 ntBASIC21.64■■□□□ 1.05
SRRM3A6NNA2 OXCT2P1-201ENST00000447263 1535 ntBASIC21.64■■□□□ 1.05
SRRM3A6NNA2 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.64■■□□□ 1.05
SRRM3A6NNA2 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SRRM3A6NNA2 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.64■■□□□ 1.05
SRRM3A6NNA2 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.63■■□□□ 1.05
SRRM3A6NNA2 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SRRM3A6NNA2 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.63■■□□□ 1.05
SRRM3A6NNA2 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms