Protein–RNA interactions for Protein: A6H8M9

CDHR4, Cadherin-related family member 4, humanhuman

Predictions only

Length 788 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4A6H8M9 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDHR4A6H8M9 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDHR4A6H8M9 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDHR4A6H8M9 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CDHR4A6H8M9 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.32■□□□□ 0.68
CDHR4A6H8M9 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDHR4A6H8M9 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDHR4A6H8M9 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDHR4A6H8M9 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDHR4A6H8M9 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.32■□□□□ 0.68
CDHR4A6H8M9 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.32■□□□□ 0.68
CDHR4A6H8M9 MIR638-201ENST00000385237 100 ntBASIC19.32■□□□□ 0.68
CDHR4A6H8M9 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
CDHR4A6H8M9 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.32■□□□□ 0.68
CDHR4A6H8M9 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.32■□□□□ 0.68
CDHR4A6H8M9 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDHR4A6H8M9 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.32■□□□□ 0.68
CDHR4A6H8M9 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.32■□□□□ 0.68
CDHR4A6H8M9 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.32■□□□□ 0.68
CDHR4A6H8M9 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDHR4A6H8M9 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
CDHR4A6H8M9 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDHR4A6H8M9 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDHR4A6H8M9 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.31■□□□□ 0.68
CDHR4A6H8M9 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDHR4A6H8M9 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CDHR4A6H8M9 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.31■□□□□ 0.68
CDHR4A6H8M9 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.31■□□□□ 0.68
CDHR4A6H8M9 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDHR4A6H8M9 IRS3P-201ENST00000223076 1006 ntBASIC19.31■□□□□ 0.68
CDHR4A6H8M9 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDHR4A6H8M9 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.31■□□□□ 0.68
CDHR4A6H8M9 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.31■□□□□ 0.68
CDHR4A6H8M9 AC105265.2-201ENST00000467189 838 ntBASIC19.31■□□□□ 0.68
CDHR4A6H8M9 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.31■□□□□ 0.68
CDHR4A6H8M9 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.31■□□□□ 0.68
CDHR4A6H8M9 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.31■□□□□ 0.68
CDHR4A6H8M9 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDHR4A6H8M9 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDHR4A6H8M9 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDHR4A6H8M9 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDHR4A6H8M9 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDHR4A6H8M9 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CDHR4A6H8M9 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.3■□□□□ 0.68
CDHR4A6H8M9 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.3■□□□□ 0.68
CDHR4A6H8M9 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDHR4A6H8M9 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.3■□□□□ 0.68
CDHR4A6H8M9 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.3■□□□□ 0.68
CDHR4A6H8M9 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.3■□□□□ 0.68
CDHR4A6H8M9 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDHR4A6H8M9 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDHR4A6H8M9 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.29■□□□□ 0.68
CDHR4A6H8M9 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CDHR4A6H8M9 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDHR4A6H8M9 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDHR4A6H8M9 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDHR4A6H8M9 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDHR4A6H8M9 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.29■□□□□ 0.68
CDHR4A6H8M9 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDHR4A6H8M9 EEF1DP3-203ENST00000566025 782 ntBASIC19.29■□□□□ 0.68
CDHR4A6H8M9 MIR6084-201ENST00000622012 110 ntBASIC19.29■□□□□ 0.68
CDHR4A6H8M9 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDHR4A6H8M9 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDHR4A6H8M9 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDHR4A6H8M9 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDHR4A6H8M9 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDHR4A6H8M9 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.29■□□□□ 0.68
CDHR4A6H8M9 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDHR4A6H8M9 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDHR4A6H8M9 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.28■□□□□ 0.68
CDHR4A6H8M9 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.28■□□□□ 0.68
CDHR4A6H8M9 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDHR4A6H8M9 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDHR4A6H8M9 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDHR4A6H8M9 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDHR4A6H8M9 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDHR4A6H8M9 AC053503.5-201ENST00000601508 636 ntBASIC19.28■□□□□ 0.68
CDHR4A6H8M9 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDHR4A6H8M9 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CDHR4A6H8M9 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDHR4A6H8M9 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDHR4A6H8M9 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
CDHR4A6H8M9 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CDHR4A6H8M9 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CDHR4A6H8M9 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CDHR4A6H8M9 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.68
CDHR4A6H8M9 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.27■□□□□ 0.68
CDHR4A6H8M9 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDHR4A6H8M9 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDHR4A6H8M9 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CDHR4A6H8M9 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.27■□□□□ 0.68
CDHR4A6H8M9 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.27■□□□□ 0.68
CDHR4A6H8M9 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDHR4A6H8M9 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.27■□□□□ 0.68
CDHR4A6H8M9 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CDHR4A6H8M9 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CDHR4A6H8M9 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDHR4A6H8M9 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDHR4A6H8M9 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDHR4A6H8M9 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms