Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.17■□□□□ 0.98
TCRBV9S1A1TA0A576 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.17■□□□□ 0.98
TCRBV9S1A1TA0A576 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TCRBV9S1A1TA0A576 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TCRBV9S1A1TA0A576 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.17■□□□□ 0.98
TCRBV9S1A1TA0A576 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TCRBV9S1A1TA0A576 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TCRBV9S1A1TA0A576 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TCRBV9S1A1TA0A576 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TCRBV9S1A1TA0A576 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TCRBV9S1A1TA0A576 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
TCRBV9S1A1TA0A576 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TCRBV9S1A1TA0A576 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TCRBV9S1A1TA0A576 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TCRBV9S1A1TA0A576 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TCRBV9S1A1TA0A576 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TCRBV9S1A1TA0A576 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
TCRBV9S1A1TA0A576 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
TCRBV9S1A1TA0A576 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.16■□□□□ 0.98
TCRBV9S1A1TA0A576 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
TCRBV9S1A1TA0A576 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TCRBV9S1A1TA0A576 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TCRBV9S1A1TA0A576 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TCRBV9S1A1TA0A576 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.16■□□□□ 0.98
TCRBV9S1A1TA0A576 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.16■□□□□ 0.98
TCRBV9S1A1TA0A576 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TCRBV9S1A1TA0A576 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
TCRBV9S1A1TA0A576 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TCRBV9S1A1TA0A576 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
TCRBV9S1A1TA0A576 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TCRBV9S1A1TA0A576 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.15■□□□□ 0.98
TCRBV9S1A1TA0A576 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.15■□□□□ 0.98
TCRBV9S1A1TA0A576 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.15■□□□□ 0.98
TCRBV9S1A1TA0A576 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TCRBV9S1A1TA0A576 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
TCRBV9S1A1TA0A576 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TCRBV9S1A1TA0A576 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TCRBV9S1A1TA0A576 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.15■□□□□ 0.98
TCRBV9S1A1TA0A576 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TCRBV9S1A1TA0A576 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.15■□□□□ 0.98
TCRBV9S1A1TA0A576 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
TCRBV9S1A1TA0A576 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.15■□□□□ 0.98
TCRBV9S1A1TA0A576 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TCRBV9S1A1TA0A576 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TCRBV9S1A1TA0A576 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
TCRBV9S1A1TA0A576 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
TCRBV9S1A1TA0A576 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
TCRBV9S1A1TA0A576 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
TCRBV9S1A1TA0A576 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
TCRBV9S1A1TA0A576 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
TCRBV9S1A1TA0A576 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.14■□□□□ 0.98
TCRBV9S1A1TA0A576 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
TCRBV9S1A1TA0A576 AP005212.1-201ENST00000581547 1997 ntBASIC21.14■□□□□ 0.98
TCRBV9S1A1TA0A576 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TCRBV9S1A1TA0A576 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TCRBV9S1A1TA0A576 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TCRBV9S1A1TA0A576 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.14■□□□□ 0.97
TCRBV9S1A1TA0A576 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TCRBV9S1A1TA0A576 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.14■□□□□ 0.97
TCRBV9S1A1TA0A576 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TCRBV9S1A1TA0A576 AL136116.3-201ENST00000402907 1138 ntBASIC21.14■□□□□ 0.97
TCRBV9S1A1TA0A576 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TCRBV9S1A1TA0A576 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.14■□□□□ 0.97
TCRBV9S1A1TA0A576 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.14■□□□□ 0.97
TCRBV9S1A1TA0A576 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TCRBV9S1A1TA0A576 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.14■□□□□ 0.97
TCRBV9S1A1TA0A576 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TCRBV9S1A1TA0A576 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TCRBV9S1A1TA0A576 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TCRBV9S1A1TA0A576 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TCRBV9S1A1TA0A576 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TCRBV9S1A1TA0A576 AC073314.1-201ENST00000568729 2216 ntBASIC21.13■□□□□ 0.97
TCRBV9S1A1TA0A576 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.13■□□□□ 0.97
TCRBV9S1A1TA0A576 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
TCRBV9S1A1TA0A576 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TCRBV9S1A1TA0A576 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TCRBV9S1A1TA0A576 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TCRBV9S1A1TA0A576 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TCRBV9S1A1TA0A576 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TCRBV9S1A1TA0A576 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TCRBV9S1A1TA0A576 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TCRBV9S1A1TA0A576 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
TCRBV9S1A1TA0A576 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
TCRBV9S1A1TA0A576 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.13■□□□□ 0.97
TCRBV9S1A1TA0A576 AC233992.3-201ENST00000607491 485 ntBASIC21.13■□□□□ 0.97
TCRBV9S1A1TA0A576 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
TCRBV9S1A1TA0A576 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TCRBV9S1A1TA0A576 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.13■□□□□ 0.97
TCRBV9S1A1TA0A576 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TCRBV9S1A1TA0A576 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
TCRBV9S1A1TA0A576 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TCRBV9S1A1TA0A576 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
TCRBV9S1A1TA0A576 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TCRBV9S1A1TA0A576 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TCRBV9S1A1TA0A576 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.12■□□□□ 0.97
TCRBV9S1A1TA0A576 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TCRBV9S1A1TA0A576 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TCRBV9S1A1TA0A576 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TCRBV9S1A1TA0A576 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TCRBV9S1A1TA0A576 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms