Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 NARF-205ENST00000412079 1760 ntTSL 5 BASIC14.85□□□□□ -0.03
TRBV27A0A0K0K1C4 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC14.85□□□□□ -0.03
TRBV27A0A0K0K1C4 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV27A0A0K0K1C4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV27A0A0K0K1C4 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TRBV27A0A0K0K1C4 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
TRBV27A0A0K0K1C4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV27A0A0K0K1C4 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV27A0A0K0K1C4 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
TRBV27A0A0K0K1C4 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV27A0A0K0K1C4 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TRBV27A0A0K0K1C4 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC14.85□□□□□ -0.03
TRBV27A0A0K0K1C4 MIR3181-201ENST00000578512 73 ntBASIC14.85□□□□□ -0.03
TRBV27A0A0K0K1C4 AC099791.2-201ENST00000605725 427 ntBASIC14.85□□□□□ -0.03
TRBV27A0A0K0K1C4 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
TRBV27A0A0K0K1C4 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV27A0A0K0K1C4 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TRBV27A0A0K0K1C4 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
TRBV27A0A0K0K1C4 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
TRBV27A0A0K0K1C4 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV27A0A0K0K1C4 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV27A0A0K0K1C4 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV27A0A0K0K1C4 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV27A0A0K0K1C4 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV27A0A0K0K1C4 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV27A0A0K0K1C4 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV27A0A0K0K1C4 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV27A0A0K0K1C4 AP006587.3-201ENST00000525742 1516 ntBASIC14.84□□□□□ -0.03
TRBV27A0A0K0K1C4 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC14.84□□□□□ -0.03
TRBV27A0A0K0K1C4 AC239859.2-201ENST00000444165 318 ntBASIC14.84□□□□□ -0.03
TRBV27A0A0K0K1C4 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC14.84□□□□□ -0.03
TRBV27A0A0K0K1C4 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC14.84□□□□□ -0.03
TRBV27A0A0K0K1C4 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC14.84□□□□□ -0.03
TRBV27A0A0K0K1C4 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV27A0A0K0K1C4 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC14.84□□□□□ -0.03
TRBV27A0A0K0K1C4 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV27A0A0K0K1C4 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV27A0A0K0K1C4 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC14.84□□□□□ -0.03
TRBV27A0A0K0K1C4 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
TRBV27A0A0K0K1C4 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC14.84□□□□□ -0.03
TRBV27A0A0K0K1C4 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV27A0A0K0K1C4 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC14.84□□□□□ -0.03
TRBV27A0A0K0K1C4 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
TRBV27A0A0K0K1C4 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV27A0A0K0K1C4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV27A0A0K0K1C4 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC14.83□□□□□ -0.03
TRBV27A0A0K0K1C4 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRBV27A0A0K0K1C4 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV27A0A0K0K1C4 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV27A0A0K0K1C4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV27A0A0K0K1C4 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV27A0A0K0K1C4 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
TRBV27A0A0K0K1C4 STX5-203ENST00000394690 1568 ntTSL 5 BASIC14.83□□□□□ -0.04
TRBV27A0A0K0K1C4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
TRBV27A0A0K0K1C4 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV27A0A0K0K1C4 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC14.83□□□□□ -0.04
TRBV27A0A0K0K1C4 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
TRBV27A0A0K0K1C4 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC14.83□□□□□ -0.04
TRBV27A0A0K0K1C4 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC14.83□□□□□ -0.04
TRBV27A0A0K0K1C4 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC14.83□□□□□ -0.04
TRBV27A0A0K0K1C4 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV27A0A0K0K1C4 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
TRBV27A0A0K0K1C4 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TRBV27A0A0K0K1C4 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV27A0A0K0K1C4 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV27A0A0K0K1C4 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC14.83□□□□□ -0.04
TRBV27A0A0K0K1C4 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV27A0A0K0K1C4 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC14.83□□□□□ -0.04
TRBV27A0A0K0K1C4 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
TRBV27A0A0K0K1C4 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV27A0A0K0K1C4 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV27A0A0K0K1C4 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV27A0A0K0K1C4 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TRBV27A0A0K0K1C4 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
TRBV27A0A0K0K1C4 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV27A0A0K0K1C4 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV27A0A0K0K1C4 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV27A0A0K0K1C4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV27A0A0K0K1C4 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC14.82□□□□□ -0.04
TRBV27A0A0K0K1C4 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV27A0A0K0K1C4 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC14.82□□□□□ -0.04
TRBV27A0A0K0K1C4 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV27A0A0K0K1C4 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV27A0A0K0K1C4 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV27A0A0K0K1C4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC14.82□□□□□ -0.04
TRBV27A0A0K0K1C4 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV27A0A0K0K1C4 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC14.82□□□□□ -0.04
TRBV27A0A0K0K1C4 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC14.82□□□□□ -0.04
TRBV27A0A0K0K1C4 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC14.82□□□□□ -0.04
TRBV27A0A0K0K1C4 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC14.82□□□□□ -0.04
TRBV27A0A0K0K1C4 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV27A0A0K0K1C4 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV27A0A0K0K1C4 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV27A0A0K0K1C4 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV27A0A0K0K1C4 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV27A0A0K0K1C4 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV27A0A0K0K1C4 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
TRBV27A0A0K0K1C4 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
TRBV27A0A0K0K1C4 AC121338.2-201ENST00000622535 1744 ntBASIC14.81□□□□□ -0.04
TRBV27A0A0K0K1C4 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms