Protein–RNA interactions for Protein: A0A0C4DH25

IGKV3D-20, Immunoglobulin kappa variable 3D-20, humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-20A0A0C4DH25 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
IGKV3D-20A0A0C4DH25 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
IGKV3D-20A0A0C4DH25 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
IGKV3D-20A0A0C4DH25 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC15.61■□□□□ 0.09
IGKV3D-20A0A0C4DH25 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
IGKV3D-20A0A0C4DH25 AC010525.1-201ENST00000585559 441 ntBASIC15.61■□□□□ 0.09
IGKV3D-20A0A0C4DH25 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
IGKV3D-20A0A0C4DH25 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
IGKV3D-20A0A0C4DH25 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
IGKV3D-20A0A0C4DH25 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
IGKV3D-20A0A0C4DH25 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
IGKV3D-20A0A0C4DH25 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC15.61■□□□□ 0.09
IGKV3D-20A0A0C4DH25 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
IGKV3D-20A0A0C4DH25 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
IGKV3D-20A0A0C4DH25 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC15.6■□□□□ 0.09
IGKV3D-20A0A0C4DH25 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
IGKV3D-20A0A0C4DH25 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
IGKV3D-20A0A0C4DH25 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC15.6■□□□□ 0.09
IGKV3D-20A0A0C4DH25 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
IGKV3D-20A0A0C4DH25 KRT16P3-201ENST00000439127 1283 ntBASIC15.6■□□□□ 0.09
IGKV3D-20A0A0C4DH25 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC15.6■□□□□ 0.09
IGKV3D-20A0A0C4DH25 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
IGKV3D-20A0A0C4DH25 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
IGKV3D-20A0A0C4DH25 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC15.6■□□□□ 0.09
IGKV3D-20A0A0C4DH25 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC15.6■□□□□ 0.09
IGKV3D-20A0A0C4DH25 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
IGKV3D-20A0A0C4DH25 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
IGKV3D-20A0A0C4DH25 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
IGKV3D-20A0A0C4DH25 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
IGKV3D-20A0A0C4DH25 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
IGKV3D-20A0A0C4DH25 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
IGKV3D-20A0A0C4DH25 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC15.59■□□□□ 0.09
IGKV3D-20A0A0C4DH25 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
IGKV3D-20A0A0C4DH25 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
IGKV3D-20A0A0C4DH25 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
IGKV3D-20A0A0C4DH25 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC15.59■□□□□ 0.09
IGKV3D-20A0A0C4DH25 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
IGKV3D-20A0A0C4DH25 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
IGKV3D-20A0A0C4DH25 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
IGKV3D-20A0A0C4DH25 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
IGKV3D-20A0A0C4DH25 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
IGKV3D-20A0A0C4DH25 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC15.59■□□□□ 0.09
IGKV3D-20A0A0C4DH25 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
IGKV3D-20A0A0C4DH25 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
IGKV3D-20A0A0C4DH25 AP004607.7-201ENST00000527152 1677 ntBASIC15.59■□□□□ 0.09
IGKV3D-20A0A0C4DH25 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
IGKV3D-20A0A0C4DH25 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
IGKV3D-20A0A0C4DH25 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
IGKV3D-20A0A0C4DH25 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
IGKV3D-20A0A0C4DH25 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
IGKV3D-20A0A0C4DH25 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
IGKV3D-20A0A0C4DH25 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
IGKV3D-20A0A0C4DH25 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
IGKV3D-20A0A0C4DH25 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC15.58■□□□□ 0.09
IGKV3D-20A0A0C4DH25 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
IGKV3D-20A0A0C4DH25 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
IGKV3D-20A0A0C4DH25 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
IGKV3D-20A0A0C4DH25 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
IGKV3D-20A0A0C4DH25 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
IGKV3D-20A0A0C4DH25 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
IGKV3D-20A0A0C4DH25 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC15.58■□□□□ 0.08
IGKV3D-20A0A0C4DH25 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
IGKV3D-20A0A0C4DH25 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
IGKV3D-20A0A0C4DH25 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
IGKV3D-20A0A0C4DH25 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
IGKV3D-20A0A0C4DH25 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
IGKV3D-20A0A0C4DH25 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
IGKV3D-20A0A0C4DH25 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC15.58■□□□□ 0.08
IGKV3D-20A0A0C4DH25 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
IGKV3D-20A0A0C4DH25 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
IGKV3D-20A0A0C4DH25 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IGKV3D-20A0A0C4DH25 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IGKV3D-20A0A0C4DH25 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IGKV3D-20A0A0C4DH25 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15.57■□□□□ 0.08
IGKV3D-20A0A0C4DH25 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
IGKV3D-20A0A0C4DH25 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
IGKV3D-20A0A0C4DH25 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC15.57■□□□□ 0.08
IGKV3D-20A0A0C4DH25 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC15.57■□□□□ 0.08
IGKV3D-20A0A0C4DH25 PALM-207ENST00000590161 2137 ntTSL 4 BASIC15.57■□□□□ 0.08
IGKV3D-20A0A0C4DH25 AL356740.2-201ENST00000601559 647 ntBASIC15.57■□□□□ 0.08
IGKV3D-20A0A0C4DH25 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC15.57■□□□□ 0.08
IGKV3D-20A0A0C4DH25 RASSF1-AS1-201ENST00000629828 790 ntBASIC15.57■□□□□ 0.08
IGKV3D-20A0A0C4DH25 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC15.57■□□□□ 0.08
IGKV3D-20A0A0C4DH25 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
IGKV3D-20A0A0C4DH25 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IGKV3D-20A0A0C4DH25 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
IGKV3D-20A0A0C4DH25 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
IGKV3D-20A0A0C4DH25 AC092667.1-201ENST00000434301 2586 ntBASIC15.57■□□□□ 0.08
IGKV3D-20A0A0C4DH25 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
IGKV3D-20A0A0C4DH25 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IGKV3D-20A0A0C4DH25 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IGKV3D-20A0A0C4DH25 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
IGKV3D-20A0A0C4DH25 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
IGKV3D-20A0A0C4DH25 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IGKV3D-20A0A0C4DH25 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IGKV3D-20A0A0C4DH25 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC15.56■□□□□ 0.08
IGKV3D-20A0A0C4DH25 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
IGKV3D-20A0A0C4DH25 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
IGKV3D-20A0A0C4DH25 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC15.56■□□□□ 0.08
IGKV3D-20A0A0C4DH25 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms