Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
TRAV22A0A0B4J277 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAV22A0A0B4J277 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
TRAV22A0A0B4J277 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAV22A0A0B4J277 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
TRAV22A0A0B4J277 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAV22A0A0B4J277 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC11.93□□□□□ -0.5
TRAV22A0A0B4J277 AL157400.5-201ENST00000507624 621 ntBASIC11.93□□□□□ -0.5
TRAV22A0A0B4J277 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TRAV22A0A0B4J277 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC11.93□□□□□ -0.5
TRAV22A0A0B4J277 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
TRAV22A0A0B4J277 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TRAV22A0A0B4J277 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC11.93□□□□□ -0.5
TRAV22A0A0B4J277 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAV22A0A0B4J277 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAV22A0A0B4J277 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAV22A0A0B4J277 FZD10-202ENST00000539839 3282 ntBASIC11.93□□□□□ -0.5
TRAV22A0A0B4J277 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TRAV22A0A0B4J277 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC11.93□□□□□ -0.5
TRAV22A0A0B4J277 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAV22A0A0B4J277 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAV22A0A0B4J277 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRAV22A0A0B4J277 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRAV22A0A0B4J277 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TRAV22A0A0B4J277 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRAV22A0A0B4J277 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRAV22A0A0B4J277 REST-210ENST00000638187 1334 ntTSL 5 BASIC11.92□□□□□ -0.5
TRAV22A0A0B4J277 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRAV22A0A0B4J277 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC11.92□□□□□ -0.5
TRAV22A0A0B4J277 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TRAV22A0A0B4J277 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRAV22A0A0B4J277 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRAV22A0A0B4J277 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC11.92□□□□□ -0.5
TRAV22A0A0B4J277 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRAV22A0A0B4J277 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRAV22A0A0B4J277 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC11.92□□□□□ -0.5
TRAV22A0A0B4J277 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TRAV22A0A0B4J277 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
TRAV22A0A0B4J277 PCDHAC2-203ENST00000615316 3011 ntBASIC11.92□□□□□ -0.5
TRAV22A0A0B4J277 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRAV22A0A0B4J277 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRAV22A0A0B4J277 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
TRAV22A0A0B4J277 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
TRAV22A0A0B4J277 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRAV22A0A0B4J277 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TRAV22A0A0B4J277 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRAV22A0A0B4J277 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRAV22A0A0B4J277 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRAV22A0A0B4J277 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRAV22A0A0B4J277 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
TRAV22A0A0B4J277 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TRAV22A0A0B4J277 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC11.92□□□□□ -0.5
TRAV22A0A0B4J277 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
TRAV22A0A0B4J277 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRAV22A0A0B4J277 AC131274.2-201ENST00000580697 1507 ntBASIC11.91□□□□□ -0.5
TRAV22A0A0B4J277 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TRAV22A0A0B4J277 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TRAV22A0A0B4J277 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC11.91□□□□□ -0.5
TRAV22A0A0B4J277 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
TRAV22A0A0B4J277 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC11.91□□□□□ -0.5
TRAV22A0A0B4J277 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC11.91□□□□□ -0.5
TRAV22A0A0B4J277 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TRAV22A0A0B4J277 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRAV22A0A0B4J277 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRAV22A0A0B4J277 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC11.91□□□□□ -0.5
TRAV22A0A0B4J277 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRAV22A0A0B4J277 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
TRAV22A0A0B4J277 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
TRAV22A0A0B4J277 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TRAV22A0A0B4J277 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRAV22A0A0B4J277 AR-207ENST00000612010 3896 ntTSL 5 BASIC11.91□□□□□ -0.5
TRAV22A0A0B4J277 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRAV22A0A0B4J277 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TRAV22A0A0B4J277 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRAV22A0A0B4J277 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRAV22A0A0B4J277 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
TRAV22A0A0B4J277 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRAV22A0A0B4J277 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRAV22A0A0B4J277 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
TRAV22A0A0B4J277 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC11.91□□□□□ -0.5
TRAV22A0A0B4J277 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC11.91□□□□□ -0.5
TRAV22A0A0B4J277 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRAV22A0A0B4J277 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRAV22A0A0B4J277 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRAV22A0A0B4J277 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRAV22A0A0B4J277 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRAV22A0A0B4J277 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRAV22A0A0B4J277 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRAV22A0A0B4J277 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRAV22A0A0B4J277 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRAV22A0A0B4J277 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRAV22A0A0B4J277 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TRAV22A0A0B4J277 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC11.9□□□□□ -0.5
TRAV22A0A0B4J277 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRAV22A0A0B4J277 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TRAV22A0A0B4J277 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRAV22A0A0B4J277 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRAV22A0A0B4J277 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRAV22A0A0B4J277 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRAV22A0A0B4J277 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms