Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV20A0A0B4J274 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAV20A0A0B4J274 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV20A0A0B4J274 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV20A0A0B4J274 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.81■□□□□ 0.44
TRAV20A0A0B4J274 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV20A0A0B4J274 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV20A0A0B4J274 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.81■□□□□ 0.44
TRAV20A0A0B4J274 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV20A0A0B4J274 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.8■□□□□ 0.44
TRAV20A0A0B4J274 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV20A0A0B4J274 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV20A0A0B4J274 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.8■□□□□ 0.44
TRAV20A0A0B4J274 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TRAV20A0A0B4J274 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV20A0A0B4J274 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV20A0A0B4J274 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV20A0A0B4J274 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV20A0A0B4J274 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV20A0A0B4J274 HLA-L-209ENST00000420110 1011 ntBASIC17.8■□□□□ 0.44
TRAV20A0A0B4J274 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.8■□□□□ 0.44
TRAV20A0A0B4J274 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.8■□□□□ 0.44
TRAV20A0A0B4J274 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.8■□□□□ 0.44
TRAV20A0A0B4J274 ESRRAP2-201ENST00000418437 1549 ntBASIC17.8■□□□□ 0.44
TRAV20A0A0B4J274 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV20A0A0B4J274 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV20A0A0B4J274 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV20A0A0B4J274 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV20A0A0B4J274 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV20A0A0B4J274 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV20A0A0B4J274 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV20A0A0B4J274 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
TRAV20A0A0B4J274 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TRAV20A0A0B4J274 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV20A0A0B4J274 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV20A0A0B4J274 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.79■□□□□ 0.44
TRAV20A0A0B4J274 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV20A0A0B4J274 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV20A0A0B4J274 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV20A0A0B4J274 RAP2CP1-201ENST00000605103 478 ntBASIC17.79■□□□□ 0.44
TRAV20A0A0B4J274 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.79■□□□□ 0.44
TRAV20A0A0B4J274 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.79■□□□□ 0.44
TRAV20A0A0B4J274 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TRAV20A0A0B4J274 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV20A0A0B4J274 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.79■□□□□ 0.44
TRAV20A0A0B4J274 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV20A0A0B4J274 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV20A0A0B4J274 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV20A0A0B4J274 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV20A0A0B4J274 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
TRAV20A0A0B4J274 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC17.78■□□□□ 0.44
TRAV20A0A0B4J274 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV20A0A0B4J274 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV20A0A0B4J274 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV20A0A0B4J274 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
TRAV20A0A0B4J274 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.78■□□□□ 0.44
TRAV20A0A0B4J274 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
TRAV20A0A0B4J274 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV20A0A0B4J274 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.78■□□□□ 0.44
TRAV20A0A0B4J274 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.78■□□□□ 0.44
TRAV20A0A0B4J274 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
TRAV20A0A0B4J274 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.78■□□□□ 0.44
TRAV20A0A0B4J274 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.78■□□□□ 0.44
TRAV20A0A0B4J274 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV20A0A0B4J274 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV20A0A0B4J274 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV20A0A0B4J274 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV20A0A0B4J274 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.78■□□□□ 0.44
TRAV20A0A0B4J274 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV20A0A0B4J274 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV20A0A0B4J274 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV20A0A0B4J274 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV20A0A0B4J274 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV20A0A0B4J274 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV20A0A0B4J274 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV20A0A0B4J274 AC006970.2-201ENST00000450065 779 ntBASIC17.77■□□□□ 0.44
TRAV20A0A0B4J274 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.77■□□□□ 0.44
TRAV20A0A0B4J274 AC079089.2-201ENST00000531211 1277 ntBASIC17.77■□□□□ 0.44
TRAV20A0A0B4J274 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.77■□□□□ 0.44
TRAV20A0A0B4J274 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.77■□□□□ 0.44
TRAV20A0A0B4J274 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.77■□□□□ 0.44
TRAV20A0A0B4J274 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.77■□□□□ 0.44
TRAV20A0A0B4J274 AC011767.1-201ENST00000617410 1153 ntBASIC17.77■□□□□ 0.44
TRAV20A0A0B4J274 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV20A0A0B4J274 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV20A0A0B4J274 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.77■□□□□ 0.43
TRAV20A0A0B4J274 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRAV20A0A0B4J274 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRAV20A0A0B4J274 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV20A0A0B4J274 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV20A0A0B4J274 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV20A0A0B4J274 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.76■□□□□ 0.43
TRAV20A0A0B4J274 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV20A0A0B4J274 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV20A0A0B4J274 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV20A0A0B4J274 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.76■□□□□ 0.43
TRAV20A0A0B4J274 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.76■□□□□ 0.43
TRAV20A0A0B4J274 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV20A0A0B4J274 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
TRAV20A0A0B4J274 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms