Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC14.62□□□□□ -0.07
TRBV6-8A0A0A6YYG3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC14.62□□□□□ -0.07
TRBV6-8A0A0A6YYG3 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC14.62□□□□□ -0.07
TRBV6-8A0A0A6YYG3 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV6-8A0A0A6YYG3 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV6-8A0A0A6YYG3 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV6-8A0A0A6YYG3 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV6-8A0A0A6YYG3 AC055733.4-201ENST00000638462 1354 ntBASIC14.61□□□□□ -0.07
TRBV6-8A0A0A6YYG3 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC14.61□□□□□ -0.07
TRBV6-8A0A0A6YYG3 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-8A0A0A6YYG3 STX5-203ENST00000394690 1568 ntTSL 5 BASIC14.61□□□□□ -0.07
TRBV6-8A0A0A6YYG3 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-8A0A0A6YYG3 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TRBV6-8A0A0A6YYG3 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TRBV6-8A0A0A6YYG3 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC14.61□□□□□ -0.07
TRBV6-8A0A0A6YYG3 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TRBV6-8A0A0A6YYG3 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-8A0A0A6YYG3 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-8A0A0A6YYG3 MIR572-201ENST00000384983 95 ntBASIC14.61□□□□□ -0.07
TRBV6-8A0A0A6YYG3 MIR939-201ENST00000401314 82 ntBASIC14.61□□□□□ -0.07
TRBV6-8A0A0A6YYG3 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC14.61□□□□□ -0.07
TRBV6-8A0A0A6YYG3 AC110285.6-201ENST00000617652 491 ntBASIC14.61□□□□□ -0.07
TRBV6-8A0A0A6YYG3 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-8A0A0A6YYG3 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TRBV6-8A0A0A6YYG3 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-8A0A0A6YYG3 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC14.61□□□□□ -0.07
TRBV6-8A0A0A6YYG3 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC14.61□□□□□ -0.07
TRBV6-8A0A0A6YYG3 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-8A0A0A6YYG3 AC005224.4-201ENST00000583262 1652 ntBASIC14.61□□□□□ -0.07
TRBV6-8A0A0A6YYG3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-8A0A0A6YYG3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-8A0A0A6YYG3 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-8A0A0A6YYG3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-8A0A0A6YYG3 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV6-8A0A0A6YYG3 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV6-8A0A0A6YYG3 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
TRBV6-8A0A0A6YYG3 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV6-8A0A0A6YYG3 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC14.6□□□□□ -0.07
TRBV6-8A0A0A6YYG3 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
TRBV6-8A0A0A6YYG3 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
TRBV6-8A0A0A6YYG3 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV6-8A0A0A6YYG3 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV6-8A0A0A6YYG3 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
TRBV6-8A0A0A6YYG3 EBPL-204ENST00000378272 766 ntTSL 3 BASIC14.6□□□□□ -0.07
TRBV6-8A0A0A6YYG3 NALT1-201ENST00000429224 738 ntTSL 5 BASIC14.6□□□□□ -0.07
TRBV6-8A0A0A6YYG3 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC14.6□□□□□ -0.07
TRBV6-8A0A0A6YYG3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC14.6□□□□□ -0.07
TRBV6-8A0A0A6YYG3 AF213884.3-201ENST00000563833 479 ntBASIC14.6□□□□□ -0.07
TRBV6-8A0A0A6YYG3 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC14.6□□□□□ -0.07
TRBV6-8A0A0A6YYG3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC14.6□□□□□ -0.07
TRBV6-8A0A0A6YYG3 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC14.6□□□□□ -0.07
TRBV6-8A0A0A6YYG3 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
TRBV6-8A0A0A6YYG3 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC14.6□□□□□ -0.07
TRBV6-8A0A0A6YYG3 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC14.6□□□□□ -0.07
TRBV6-8A0A0A6YYG3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV6-8A0A0A6YYG3 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV6-8A0A0A6YYG3 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV6-8A0A0A6YYG3 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
TRBV6-8A0A0A6YYG3 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV6-8A0A0A6YYG3 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV6-8A0A0A6YYG3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC14.59□□□□□ -0.07
TRBV6-8A0A0A6YYG3 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV6-8A0A0A6YYG3 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
TRBV6-8A0A0A6YYG3 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV6-8A0A0A6YYG3 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV6-8A0A0A6YYG3 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TRBV6-8A0A0A6YYG3 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV6-8A0A0A6YYG3 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV6-8A0A0A6YYG3 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV6-8A0A0A6YYG3 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV6-8A0A0A6YYG3 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV6-8A0A0A6YYG3 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV6-8A0A0A6YYG3 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV6-8A0A0A6YYG3 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV6-8A0A0A6YYG3 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC14.59□□□□□ -0.07
TRBV6-8A0A0A6YYG3 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TRBV6-8A0A0A6YYG3 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV6-8A0A0A6YYG3 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC14.59□□□□□ -0.07
TRBV6-8A0A0A6YYG3 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV6-8A0A0A6YYG3 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
TRBV6-8A0A0A6YYG3 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV6-8A0A0A6YYG3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TRBV6-8A0A0A6YYG3 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
TRBV6-8A0A0A6YYG3 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
TRBV6-8A0A0A6YYG3 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC14.58□□□□□ -0.07
TRBV6-8A0A0A6YYG3 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRBV6-8A0A0A6YYG3 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRBV6-8A0A0A6YYG3 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV6-8A0A0A6YYG3 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC14.58□□□□□ -0.08
TRBV6-8A0A0A6YYG3 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV6-8A0A0A6YYG3 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV6-8A0A0A6YYG3 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV6-8A0A0A6YYG3 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC14.58□□□□□ -0.08
TRBV6-8A0A0A6YYG3 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC14.58□□□□□ -0.08
TRBV6-8A0A0A6YYG3 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC14.58□□□□□ -0.08
TRBV6-8A0A0A6YYG3 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC14.58□□□□□ -0.08
TRBV6-8A0A0A6YYG3 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC14.58□□□□□ -0.08
TRBV6-8A0A0A6YYG3 MPST-204ENST00000404393 1329 ntTSL 5 BASIC14.58□□□□□ -0.08
TRBV6-8A0A0A6YYG3 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV6-8A0A0A6YYG3 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms