Protein–RNA interactions for Protein: A0A087WVF3

TBC1D3D, TBC1 domain family member 3D, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3DA0A087WVF3 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TBC1D3DA0A087WVF3 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TBC1D3DA0A087WVF3 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TBC1D3DA0A087WVF3 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
TBC1D3DA0A087WVF3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
TBC1D3DA0A087WVF3 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.97■□□□□ 0.95
TBC1D3DA0A087WVF3 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.97■□□□□ 0.95
TBC1D3DA0A087WVF3 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
TBC1D3DA0A087WVF3 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TBC1D3DA0A087WVF3 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
TBC1D3DA0A087WVF3 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TBC1D3DA0A087WVF3 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
TBC1D3DA0A087WVF3 AL512625.2-201ENST00000417533 625 ntBASIC20.97■□□□□ 0.95
TBC1D3DA0A087WVF3 AC073210.2-201ENST00000430369 194 ntBASIC20.97■□□□□ 0.95
TBC1D3DA0A087WVF3 AC093787.1-201ENST00000450396 207 ntBASIC20.97■□□□□ 0.95
TBC1D3DA0A087WVF3 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.97■□□□□ 0.95
TBC1D3DA0A087WVF3 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TBC1D3DA0A087WVF3 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TBC1D3DA0A087WVF3 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TBC1D3DA0A087WVF3 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TBC1D3DA0A087WVF3 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
TBC1D3DA0A087WVF3 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TBC1D3DA0A087WVF3 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TBC1D3DA0A087WVF3 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TBC1D3DA0A087WVF3 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TBC1D3DA0A087WVF3 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
TBC1D3DA0A087WVF3 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TBC1D3DA0A087WVF3 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
TBC1D3DA0A087WVF3 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TBC1D3DA0A087WVF3 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TBC1D3DA0A087WVF3 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
TBC1D3DA0A087WVF3 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.96■□□□□ 0.95
TBC1D3DA0A087WVF3 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
TBC1D3DA0A087WVF3 FAM99A-202ENST00000538190 1989 ntBASIC20.96■□□□□ 0.95
TBC1D3DA0A087WVF3 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
TBC1D3DA0A087WVF3 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TBC1D3DA0A087WVF3 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TBC1D3DA0A087WVF3 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
TBC1D3DA0A087WVF3 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TBC1D3DA0A087WVF3 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TBC1D3DA0A087WVF3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TBC1D3DA0A087WVF3 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TBC1D3DA0A087WVF3 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
TBC1D3DA0A087WVF3 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.95■□□□□ 0.94
TBC1D3DA0A087WVF3 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TBC1D3DA0A087WVF3 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TBC1D3DA0A087WVF3 AC098934.4-201ENST00000564127 592 ntBASIC20.95■□□□□ 0.94
TBC1D3DA0A087WVF3 AC243732.1-201ENST00000612648 864 ntBASIC20.95■□□□□ 0.94
TBC1D3DA0A087WVF3 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.95■□□□□ 0.94
TBC1D3DA0A087WVF3 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.95■□□□□ 0.94
TBC1D3DA0A087WVF3 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.95■□□□□ 0.94
TBC1D3DA0A087WVF3 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
TBC1D3DA0A087WVF3 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TBC1D3DA0A087WVF3 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TBC1D3DA0A087WVF3 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TBC1D3DA0A087WVF3 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TBC1D3DA0A087WVF3 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TBC1D3DA0A087WVF3 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TBC1D3DA0A087WVF3 TSPY20P-201ENST00000450910 630 ntBASIC20.94■□□□□ 0.94
TBC1D3DA0A087WVF3 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.94■□□□□ 0.94
TBC1D3DA0A087WVF3 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
TBC1D3DA0A087WVF3 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.94■□□□□ 0.94
TBC1D3DA0A087WVF3 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.94■□□□□ 0.94
TBC1D3DA0A087WVF3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TBC1D3DA0A087WVF3 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TBC1D3DA0A087WVF3 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TBC1D3DA0A087WVF3 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TBC1D3DA0A087WVF3 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
TBC1D3DA0A087WVF3 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
TBC1D3DA0A087WVF3 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TBC1D3DA0A087WVF3 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.93■□□□□ 0.94
TBC1D3DA0A087WVF3 BX276092.2-201ENST00000417668 665 ntBASIC20.93■□□□□ 0.94
TBC1D3DA0A087WVF3 AL162412.1-201ENST00000567129 965 ntBASIC20.93■□□□□ 0.94
TBC1D3DA0A087WVF3 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TBC1D3DA0A087WVF3 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TBC1D3DA0A087WVF3 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.93■□□□□ 0.94
TBC1D3DA0A087WVF3 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.93■□□□□ 0.94
TBC1D3DA0A087WVF3 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TBC1D3DA0A087WVF3 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TBC1D3DA0A087WVF3 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.92■□□□□ 0.94
TBC1D3DA0A087WVF3 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
TBC1D3DA0A087WVF3 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
TBC1D3DA0A087WVF3 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.92■□□□□ 0.94
TBC1D3DA0A087WVF3 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.92■□□□□ 0.94
TBC1D3DA0A087WVF3 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.92■□□□□ 0.94
TBC1D3DA0A087WVF3 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.92■□□□□ 0.94
TBC1D3DA0A087WVF3 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.92■□□□□ 0.94
TBC1D3DA0A087WVF3 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.92■□□□□ 0.94
TBC1D3DA0A087WVF3 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.92■□□□□ 0.94
TBC1D3DA0A087WVF3 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.92■□□□□ 0.94
TBC1D3DA0A087WVF3 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.92■□□□□ 0.94
TBC1D3DA0A087WVF3 TMEM191A-211ENST00000637163 1067 ntBASIC20.92■□□□□ 0.94
TBC1D3DA0A087WVF3 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TBC1D3DA0A087WVF3 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TBC1D3DA0A087WVF3 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.92■□□□□ 0.94
TBC1D3DA0A087WVF3 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TBC1D3DA0A087WVF3 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.92■□□□□ 0.94
TBC1D3DA0A087WVF3 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.92■□□□□ 0.94
TBC1D3DA0A087WVF3 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TBC1D3DA0A087WVF3 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms