Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV18A0A075B6X5 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV18A0A075B6X5 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
TRAV18A0A075B6X5 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.05■□□□□ 0.48
TRAV18A0A075B6X5 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV18A0A075B6X5 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TRAV18A0A075B6X5 Z92544.1-202ENST00000571933 1220 ntBASIC18.05■□□□□ 0.48
TRAV18A0A075B6X5 AC241377.3-202ENST00000626088 1088 ntBASIC18.05■□□□□ 0.48
TRAV18A0A075B6X5 AC241585.3-202ENST00000628937 1088 ntBASIC18.05■□□□□ 0.48
TRAV18A0A075B6X5 AC245100.8-202ENST00000629247 1058 ntBASIC18.05■□□□□ 0.48
TRAV18A0A075B6X5 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.05■□□□□ 0.48
TRAV18A0A075B6X5 AC068587.7-201ENST00000641602 218 ntBASIC18.05■□□□□ 0.48
TRAV18A0A075B6X5 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV18A0A075B6X5 AC006128.1-201ENST00000624704 1661 ntBASIC18.05■□□□□ 0.48
TRAV18A0A075B6X5 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.05■□□□□ 0.48
TRAV18A0A075B6X5 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.05■□□□□ 0.48
TRAV18A0A075B6X5 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TRAV18A0A075B6X5 AC073314.1-201ENST00000568729 2216 ntBASIC18.04■□□□□ 0.48
TRAV18A0A075B6X5 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
TRAV18A0A075B6X5 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.04■□□□□ 0.48
TRAV18A0A075B6X5 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
TRAV18A0A075B6X5 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
TRAV18A0A075B6X5 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV18A0A075B6X5 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.04■□□□□ 0.48
TRAV18A0A075B6X5 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV18A0A075B6X5 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.04■□□□□ 0.48
TRAV18A0A075B6X5 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV18A0A075B6X5 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.04■□□□□ 0.48
TRAV18A0A075B6X5 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV18A0A075B6X5 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.04■□□□□ 0.48
TRAV18A0A075B6X5 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.04■□□□□ 0.48
TRAV18A0A075B6X5 KRT125P-201ENST00000546827 989 ntBASIC18.04■□□□□ 0.48
TRAV18A0A075B6X5 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
TRAV18A0A075B6X5 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV18A0A075B6X5 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
TRAV18A0A075B6X5 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV18A0A075B6X5 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.04■□□□□ 0.48
TRAV18A0A075B6X5 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV18A0A075B6X5 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV18A0A075B6X5 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV18A0A075B6X5 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV18A0A075B6X5 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV18A0A075B6X5 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV18A0A075B6X5 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV18A0A075B6X5 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.03■□□□□ 0.48
TRAV18A0A075B6X5 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.03■□□□□ 0.48
TRAV18A0A075B6X5 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC18.03■□□□□ 0.48
TRAV18A0A075B6X5 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV18A0A075B6X5 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.03■□□□□ 0.48
TRAV18A0A075B6X5 AC010997.5-201ENST00000609182 354 ntBASIC18.03■□□□□ 0.48
TRAV18A0A075B6X5 pRNA.6-201ENST00000610482 90 ntBASIC18.03■□□□□ 0.48
TRAV18A0A075B6X5 pRNA.5-201ENST00000612139 90 ntBASIC18.03■□□□□ 0.48
TRAV18A0A075B6X5 pRNA.11-201ENST00000618423 90 ntBASIC18.03■□□□□ 0.48
TRAV18A0A075B6X5 pRNA.13-201ENST00000619112 90 ntBASIC18.03■□□□□ 0.48
TRAV18A0A075B6X5 AL117332.1-201ENST00000622628 974 ntBASIC18.03■□□□□ 0.48
TRAV18A0A075B6X5 AC087239.1-201ENST00000622671 572 ntBASIC18.03■□□□□ 0.48
TRAV18A0A075B6X5 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.03■□□□□ 0.48
TRAV18A0A075B6X5 AC003102.1-202ENST00000563394 1796 ntBASIC18.03■□□□□ 0.48
TRAV18A0A075B6X5 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.03■□□□□ 0.48
TRAV18A0A075B6X5 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV18A0A075B6X5 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
TRAV18A0A075B6X5 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.03■□□□□ 0.48
TRAV18A0A075B6X5 RNF165-205ENST00000588679 2904 ntBASIC18.03■□□□□ 0.48
TRAV18A0A075B6X5 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV18A0A075B6X5 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV18A0A075B6X5 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV18A0A075B6X5 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV18A0A075B6X5 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV18A0A075B6X5 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.03■□□□□ 0.48
TRAV18A0A075B6X5 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV18A0A075B6X5 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.03■□□□□ 0.48
TRAV18A0A075B6X5 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.03■□□□□ 0.48
TRAV18A0A075B6X5 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV18A0A075B6X5 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV18A0A075B6X5 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV18A0A075B6X5 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.02■□□□□ 0.48
TRAV18A0A075B6X5 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.02■□□□□ 0.48
TRAV18A0A075B6X5 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
TRAV18A0A075B6X5 PRTG-204ENST00000561292 833 ntTSL 3 BASIC18.02■□□□□ 0.48
TRAV18A0A075B6X5 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.02■□□□□ 0.48
TRAV18A0A075B6X5 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.02■□□□□ 0.48
TRAV18A0A075B6X5 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
TRAV18A0A075B6X5 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRAV18A0A075B6X5 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRAV18A0A075B6X5 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRAV18A0A075B6X5 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRAV18A0A075B6X5 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TRAV18A0A075B6X5 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRAV18A0A075B6X5 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV18A0A075B6X5 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
TRAV18A0A075B6X5 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.01■□□□□ 0.47
TRAV18A0A075B6X5 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV18A0A075B6X5 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
TRAV18A0A075B6X5 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV18A0A075B6X5 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV18A0A075B6X5 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV18A0A075B6X5 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
TRAV18A0A075B6X5 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.01■□□□□ 0.47
TRAV18A0A075B6X5 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV18A0A075B6X5 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms