Protein–RNA interactions for Protein: S4R3C0

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S4R3C0 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC16.59■□□□□ 0.25
S4R3C0 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC16.59■□□□□ 0.25
S4R3C0 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC16.59■□□□□ 0.25
S4R3C0 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
S4R3C0 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
S4R3C0 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC16.58■□□□□ 0.25
S4R3C0 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
S4R3C0 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
S4R3C0 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
S4R3C0 AC012414.1-201ENST00000556676 535 ntBASIC16.58■□□□□ 0.24
S4R3C0 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC16.58■□□□□ 0.24
S4R3C0 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
S4R3C0 BX005040.4-201ENST00000637145 1518 ntBASIC16.58■□□□□ 0.24
S4R3C0 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
S4R3C0 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
S4R3C0 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC16.58■□□□□ 0.24
S4R3C0 DYM-203ENST00000442713 2147 ntTSL 2 BASIC16.58■□□□□ 0.24
S4R3C0 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.58■□□□□ 0.24
S4R3C0 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
S4R3C0 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
S4R3C0 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
S4R3C0 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC16.57■□□□□ 0.24
S4R3C0 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC16.57■□□□□ 0.24
S4R3C0 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
S4R3C0 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC16.57■□□□□ 0.24
S4R3C0 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
S4R3C0 MFF-203ENST00000349901 1716 ntTSL 2 BASIC16.57■□□□□ 0.24
S4R3C0 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
S4R3C0 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
S4R3C0 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
S4R3C0 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC16.57■□□□□ 0.24
S4R3C0 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
S4R3C0 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
S4R3C0 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
S4R3C0 NME4-202ENST00000382940 766 ntTSL 3 BASIC16.57■□□□□ 0.24
S4R3C0 NT5C3AP1-201ENST00000394500 1012 ntBASIC16.57■□□□□ 0.24
S4R3C0 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC16.57■□□□□ 0.24
S4R3C0 NME4-211ENST00000620944 1193 ntTSL 2 BASIC16.57■□□□□ 0.24
S4R3C0 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC16.57■□□□□ 0.24
S4R3C0 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
S4R3C0 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
S4R3C0 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
S4R3C0 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC16.56■□□□□ 0.24
S4R3C0 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
S4R3C0 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC16.56■□□□□ 0.24
S4R3C0 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC16.56■□□□□ 0.24
S4R3C0 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
S4R3C0 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC16.56■□□□□ 0.24
S4R3C0 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
S4R3C0 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC16.56■□□□□ 0.24
S4R3C0 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC16.56■□□□□ 0.24
S4R3C0 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC16.56■□□□□ 0.24
S4R3C0 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
S4R3C0 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
S4R3C0 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
S4R3C0 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
S4R3C0 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
S4R3C0 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
S4R3C0 AC005224.4-201ENST00000583262 1652 ntBASIC16.56■□□□□ 0.24
S4R3C0 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
S4R3C0 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
S4R3C0 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
S4R3C0 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
S4R3C0 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC16.55■□□□□ 0.24
S4R3C0 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
S4R3C0 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
S4R3C0 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
S4R3C0 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
S4R3C0 MPST-204ENST00000404393 1329 ntTSL 5 BASIC16.55■□□□□ 0.24
S4R3C0 IRS3P-201ENST00000223076 1006 ntBASIC16.55■□□□□ 0.24
S4R3C0 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
S4R3C0 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
S4R3C0 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
S4R3C0 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
S4R3C0 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC16.55■□□□□ 0.24
S4R3C0 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
S4R3C0 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
S4R3C0 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC16.55■□□□□ 0.24
S4R3C0 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC16.55■□□□□ 0.24
S4R3C0 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC16.55■□□□□ 0.24
S4R3C0 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
S4R3C0 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
S4R3C0 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC16.55■□□□□ 0.24
S4R3C0 AL024507.2-201ENST00000606070 2574 ntBASIC16.55■□□□□ 0.24
S4R3C0 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
S4R3C0 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
S4R3C0 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
S4R3C0 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
S4R3C0 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
S4R3C0 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
S4R3C0 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
S4R3C0 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
S4R3C0 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
S4R3C0 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
S4R3C0 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC16.54■□□□□ 0.24
S4R3C0 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
S4R3C0 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
S4R3C0 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
S4R3C0 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
S4R3C0 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms