Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLCA3PQ9Y6N3 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.89■□□□□ 0.77
CLCA3PQ9Y6N3 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLCA3PQ9Y6N3 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLCA3PQ9Y6N3 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLCA3PQ9Y6N3 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLCA3PQ9Y6N3 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.89■□□□□ 0.77
CLCA3PQ9Y6N3 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLCA3PQ9Y6N3 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.89■□□□□ 0.77
CLCA3PQ9Y6N3 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.89■□□□□ 0.77
CLCA3PQ9Y6N3 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.89■□□□□ 0.77
CLCA3PQ9Y6N3 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CLCA3PQ9Y6N3 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLCA3PQ9Y6N3 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.89■□□□□ 0.77
CLCA3PQ9Y6N3 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLCA3PQ9Y6N3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLCA3PQ9Y6N3 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLCA3PQ9Y6N3 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CLCA3PQ9Y6N3 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CLCA3PQ9Y6N3 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLCA3PQ9Y6N3 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLCA3PQ9Y6N3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLCA3PQ9Y6N3 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.88■□□□□ 0.77
CLCA3PQ9Y6N3 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLCA3PQ9Y6N3 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLCA3PQ9Y6N3 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
CLCA3PQ9Y6N3 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.88■□□□□ 0.77
CLCA3PQ9Y6N3 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.88■□□□□ 0.77
CLCA3PQ9Y6N3 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.88■□□□□ 0.77
CLCA3PQ9Y6N3 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.88■□□□□ 0.77
CLCA3PQ9Y6N3 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CLCA3PQ9Y6N3 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
CLCA3PQ9Y6N3 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLCA3PQ9Y6N3 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLCA3PQ9Y6N3 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLCA3PQ9Y6N3 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLCA3PQ9Y6N3 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CLCA3PQ9Y6N3 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLCA3PQ9Y6N3 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLCA3PQ9Y6N3 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLCA3PQ9Y6N3 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLCA3PQ9Y6N3 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.87■□□□□ 0.77
CLCA3PQ9Y6N3 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CLCA3PQ9Y6N3 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.87■□□□□ 0.77
CLCA3PQ9Y6N3 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLCA3PQ9Y6N3 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.87■□□□□ 0.77
CLCA3PQ9Y6N3 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.87■□□□□ 0.77
CLCA3PQ9Y6N3 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.87■□□□□ 0.77
CLCA3PQ9Y6N3 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CLCA3PQ9Y6N3 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.87■□□□□ 0.77
CLCA3PQ9Y6N3 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CLCA3PQ9Y6N3 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLCA3PQ9Y6N3 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLCA3PQ9Y6N3 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLCA3PQ9Y6N3 AP004607.4-201ENST00000530158 1459 ntBASIC19.86■□□□□ 0.77
CLCA3PQ9Y6N3 AC004854.2-201ENST00000608450 1441 ntBASIC19.86■□□□□ 0.77
CLCA3PQ9Y6N3 C11orf96-202ENST00000528572 1834 ntBASIC19.86■□□□□ 0.77
CLCA3PQ9Y6N3 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLCA3PQ9Y6N3 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLCA3PQ9Y6N3 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.86■□□□□ 0.77
CLCA3PQ9Y6N3 KRT19P1-201ENST00000405746 1186 ntBASIC19.86■□□□□ 0.77
CLCA3PQ9Y6N3 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.86■□□□□ 0.77
CLCA3PQ9Y6N3 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLCA3PQ9Y6N3 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLCA3PQ9Y6N3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLCA3PQ9Y6N3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.86■□□□□ 0.77
CLCA3PQ9Y6N3 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLCA3PQ9Y6N3 AC003102.1-202ENST00000563394 1796 ntBASIC19.85■□□□□ 0.77
CLCA3PQ9Y6N3 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CLCA3PQ9Y6N3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLCA3PQ9Y6N3 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
CLCA3PQ9Y6N3 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLCA3PQ9Y6N3 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.85■□□□□ 0.77
CLCA3PQ9Y6N3 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLCA3PQ9Y6N3 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CLCA3PQ9Y6N3 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLCA3PQ9Y6N3 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.85■□□□□ 0.77
CLCA3PQ9Y6N3 AC104564.3-201ENST00000582367 638 ntBASIC19.85■□□□□ 0.77
CLCA3PQ9Y6N3 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLCA3PQ9Y6N3 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.85■□□□□ 0.77
CLCA3PQ9Y6N3 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLCA3PQ9Y6N3 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLCA3PQ9Y6N3 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CLCA3PQ9Y6N3 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLCA3PQ9Y6N3 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.85■□□□□ 0.77
CLCA3PQ9Y6N3 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CLCA3PQ9Y6N3 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLCA3PQ9Y6N3 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLCA3PQ9Y6N3 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.84■□□□□ 0.77
CLCA3PQ9Y6N3 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLCA3PQ9Y6N3 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLCA3PQ9Y6N3 AC026471.6-201ENST00000622954 1905 ntBASIC19.84■□□□□ 0.77
CLCA3PQ9Y6N3 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLCA3PQ9Y6N3 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.83■□□□□ 0.77
CLCA3PQ9Y6N3 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
CLCA3PQ9Y6N3 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLCA3PQ9Y6N3 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
CLCA3PQ9Y6N3 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.83■□□□□ 0.77
CLCA3PQ9Y6N3 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
CLCA3PQ9Y6N3 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms