Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SNX11Q9Y5W9 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SNX11Q9Y5W9 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SNX11Q9Y5W9 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SNX11Q9Y5W9 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SNX11Q9Y5W9 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SNX11Q9Y5W9 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
SNX11Q9Y5W9 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
SNX11Q9Y5W9 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.91■□□□□ 0.94
SNX11Q9Y5W9 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.91■□□□□ 0.94
SNX11Q9Y5W9 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.9■□□□□ 0.94
SNX11Q9Y5W9 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SNX11Q9Y5W9 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SNX11Q9Y5W9 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SNX11Q9Y5W9 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SNX11Q9Y5W9 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SNX11Q9Y5W9 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SNX11Q9Y5W9 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.9■□□□□ 0.94
SNX11Q9Y5W9 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.9■□□□□ 0.94
SNX11Q9Y5W9 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SNX11Q9Y5W9 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.9■□□□□ 0.94
SNX11Q9Y5W9 AC069236.1-201ENST00000604339 616 ntBASIC20.9■□□□□ 0.94
SNX11Q9Y5W9 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SNX11Q9Y5W9 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SNX11Q9Y5W9 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SNX11Q9Y5W9 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SNX11Q9Y5W9 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.9■□□□□ 0.94
SNX11Q9Y5W9 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
SNX11Q9Y5W9 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SNX11Q9Y5W9 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SNX11Q9Y5W9 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SNX11Q9Y5W9 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SNX11Q9Y5W9 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
SNX11Q9Y5W9 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.89■□□□□ 0.93
SNX11Q9Y5W9 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
SNX11Q9Y5W9 KRT18P29-201ENST00000397031 1267 ntBASIC20.89■□□□□ 0.93
SNX11Q9Y5W9 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.89■□□□□ 0.93
SNX11Q9Y5W9 AC093827.2-201ENST00000512654 315 ntBASIC20.89■□□□□ 0.93
SNX11Q9Y5W9 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.89■□□□□ 0.93
SNX11Q9Y5W9 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
SNX11Q9Y5W9 ITM2C-210ENST00000620962 501 ntBASIC20.89■□□□□ 0.93
SNX11Q9Y5W9 AC120498.10-201ENST00000621827 505 ntBASIC20.89■□□□□ 0.93
SNX11Q9Y5W9 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SNX11Q9Y5W9 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SNX11Q9Y5W9 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SNX11Q9Y5W9 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.89■□□□□ 0.93
SNX11Q9Y5W9 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SNX11Q9Y5W9 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SNX11Q9Y5W9 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.89■□□□□ 0.93
SNX11Q9Y5W9 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SNX11Q9Y5W9 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SNX11Q9Y5W9 AL512625.2-201ENST00000417533 625 ntBASIC20.88■□□□□ 0.93
SNX11Q9Y5W9 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.88■□□□□ 0.93
SNX11Q9Y5W9 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
SNX11Q9Y5W9 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.88■□□□□ 0.93
SNX11Q9Y5W9 AC008175.2-201ENST00000612840 297 ntBASIC20.88■□□□□ 0.93
SNX11Q9Y5W9 AC092118.2-201ENST00000613495 667 ntBASIC20.88■□□□□ 0.93
SNX11Q9Y5W9 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
SNX11Q9Y5W9 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SNX11Q9Y5W9 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SNX11Q9Y5W9 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
SNX11Q9Y5W9 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SNX11Q9Y5W9 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SNX11Q9Y5W9 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.88■□□□□ 0.93
SNX11Q9Y5W9 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.87■□□□□ 0.93
SNX11Q9Y5W9 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.87■□□□□ 0.93
SNX11Q9Y5W9 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SNX11Q9Y5W9 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNX11Q9Y5W9 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNX11Q9Y5W9 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNX11Q9Y5W9 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNX11Q9Y5W9 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.87■□□□□ 0.93
SNX11Q9Y5W9 BX276092.2-201ENST00000417668 665 ntBASIC20.87■□□□□ 0.93
SNX11Q9Y5W9 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.87■□□□□ 0.93
SNX11Q9Y5W9 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SNX11Q9Y5W9 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.87■□□□□ 0.93
SNX11Q9Y5W9 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SNX11Q9Y5W9 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.87■□□□□ 0.93
SNX11Q9Y5W9 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNX11Q9Y5W9 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SNX11Q9Y5W9 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNX11Q9Y5W9 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.86■□□□□ 0.93
SNX11Q9Y5W9 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SNX11Q9Y5W9 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNX11Q9Y5W9 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNX11Q9Y5W9 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNX11Q9Y5W9 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.86■□□□□ 0.93
SNX11Q9Y5W9 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SNX11Q9Y5W9 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.86■□□□□ 0.93
SNX11Q9Y5W9 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.86■□□□□ 0.93
SNX11Q9Y5W9 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SNX11Q9Y5W9 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.86■□□□□ 0.93
SNX11Q9Y5W9 AL117328.2-201ENST00000624617 1940 ntBASIC20.86■□□□□ 0.93
SNX11Q9Y5W9 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.86■□□□□ 0.93
SNX11Q9Y5W9 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SNX11Q9Y5W9 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.86■□□□□ 0.93
SNX11Q9Y5W9 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNX11Q9Y5W9 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.85■□□□□ 0.93
SNX11Q9Y5W9 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SNX11Q9Y5W9 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms