Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA11Q9Y5H2 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
PCDHGA11Q9Y5H2 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA11Q9Y5H2 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.41■□□□□ 0.86
PCDHGA11Q9Y5H2 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA11Q9Y5H2 AC012414.1-201ENST00000556676 535 ntBASIC20.41■□□□□ 0.86
PCDHGA11Q9Y5H2 AL354811.1-201ENST00000610286 706 ntBASIC20.41■□□□□ 0.86
PCDHGA11Q9Y5H2 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA11Q9Y5H2 AC055733.4-201ENST00000638462 1354 ntBASIC20.41■□□□□ 0.86
PCDHGA11Q9Y5H2 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA11Q9Y5H2 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHGA11Q9Y5H2 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
PCDHGA11Q9Y5H2 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGA11Q9Y5H2 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGA11Q9Y5H2 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGA11Q9Y5H2 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGA11Q9Y5H2 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGA11Q9Y5H2 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.4■□□□□ 0.86
PCDHGA11Q9Y5H2 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.4■□□□□ 0.86
PCDHGA11Q9Y5H2 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGA11Q9Y5H2 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGA11Q9Y5H2 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.4■□□□□ 0.86
PCDHGA11Q9Y5H2 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.4■□□□□ 0.86
PCDHGA11Q9Y5H2 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGA11Q9Y5H2 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGA11Q9Y5H2 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.4■□□□□ 0.86
PCDHGA11Q9Y5H2 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGA11Q9Y5H2 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.4■□□□□ 0.86
PCDHGA11Q9Y5H2 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.4■□□□□ 0.86
PCDHGA11Q9Y5H2 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
PCDHGA11Q9Y5H2 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHGA11Q9Y5H2 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHGA11Q9Y5H2 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHGA11Q9Y5H2 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHGA11Q9Y5H2 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.39■□□□□ 0.86
PCDHGA11Q9Y5H2 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
PCDHGA11Q9Y5H2 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
PCDHGA11Q9Y5H2 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.39■□□□□ 0.85
PCDHGA11Q9Y5H2 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGA11Q9Y5H2 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
PCDHGA11Q9Y5H2 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGA11Q9Y5H2 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGA11Q9Y5H2 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGA11Q9Y5H2 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.39■□□□□ 0.85
PCDHGA11Q9Y5H2 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGA11Q9Y5H2 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.39■□□□□ 0.85
PCDHGA11Q9Y5H2 AL358852.1-201ENST00000623174 1268 ntBASIC20.39■□□□□ 0.85
PCDHGA11Q9Y5H2 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGA11Q9Y5H2 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGA11Q9Y5H2 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGA11Q9Y5H2 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.38■□□□□ 0.85
PCDHGA11Q9Y5H2 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA11Q9Y5H2 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA11Q9Y5H2 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA11Q9Y5H2 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA11Q9Y5H2 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.38■□□□□ 0.85
PCDHGA11Q9Y5H2 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.38■□□□□ 0.85
PCDHGA11Q9Y5H2 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA11Q9Y5H2 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA11Q9Y5H2 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA11Q9Y5H2 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA11Q9Y5H2 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA11Q9Y5H2 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA11Q9Y5H2 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA11Q9Y5H2 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
PCDHGA11Q9Y5H2 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA11Q9Y5H2 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA11Q9Y5H2 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA11Q9Y5H2 MIR638-201ENST00000385237 100 ntBASIC20.37■□□□□ 0.85
PCDHGA11Q9Y5H2 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
PCDHGA11Q9Y5H2 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.37■□□□□ 0.85
PCDHGA11Q9Y5H2 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDHGA11Q9Y5H2 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
PCDHGA11Q9Y5H2 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA11Q9Y5H2 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA11Q9Y5H2 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDHGA11Q9Y5H2 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.36■□□□□ 0.85
PCDHGA11Q9Y5H2 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGA11Q9Y5H2 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.36■□□□□ 0.85
PCDHGA11Q9Y5H2 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGA11Q9Y5H2 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.36■□□□□ 0.85
PCDHGA11Q9Y5H2 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.36■□□□□ 0.85
PCDHGA11Q9Y5H2 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGA11Q9Y5H2 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.36■□□□□ 0.85
PCDHGA11Q9Y5H2 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGA11Q9Y5H2 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGA11Q9Y5H2 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
PCDHGA11Q9Y5H2 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDHGA11Q9Y5H2 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDHGA11Q9Y5H2 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGA11Q9Y5H2 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGA11Q9Y5H2 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGA11Q9Y5H2 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGA11Q9Y5H2 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGA11Q9Y5H2 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGA11Q9Y5H2 FEM1AP4-201ENST00000443167 1987 ntBASIC20.35■□□□□ 0.85
PCDHGA11Q9Y5H2 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGA11Q9Y5H2 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGA11Q9Y5H2 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.35■□□□□ 0.85
PCDHGA11Q9Y5H2 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms