Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.71■□□□□ 0.91
PCDHGA4Q9Y5G9 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
PCDHGA4Q9Y5G9 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGA4Q9Y5G9 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGA4Q9Y5G9 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
PCDHGA4Q9Y5G9 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGA4Q9Y5G9 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGA4Q9Y5G9 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGA4Q9Y5G9 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.7■□□□□ 0.9
PCDHGA4Q9Y5G9 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.7■□□□□ 0.9
PCDHGA4Q9Y5G9 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.7■□□□□ 0.9
PCDHGA4Q9Y5G9 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
PCDHGA4Q9Y5G9 BID-214ENST00000617586 542 ntTSL 5 BASIC20.7■□□□□ 0.9
PCDHGA4Q9Y5G9 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.7■□□□□ 0.9
PCDHGA4Q9Y5G9 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGA4Q9Y5G9 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
PCDHGA4Q9Y5G9 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGA4Q9Y5G9 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGA4Q9Y5G9 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGA4Q9Y5G9 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGA4Q9Y5G9 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGA4Q9Y5G9 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDHGA4Q9Y5G9 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDHGA4Q9Y5G9 ABHD17AP1-201ENST00000358206 933 ntBASIC20.69■□□□□ 0.9
PCDHGA4Q9Y5G9 AC006970.2-201ENST00000450065 779 ntBASIC20.69■□□□□ 0.9
PCDHGA4Q9Y5G9 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.69■□□□□ 0.9
PCDHGA4Q9Y5G9 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDHGA4Q9Y5G9 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDHGA4Q9Y5G9 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGA4Q9Y5G9 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.69■□□□□ 0.9
PCDHGA4Q9Y5G9 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.69■□□□□ 0.9
PCDHGA4Q9Y5G9 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.69■□□□□ 0.9
PCDHGA4Q9Y5G9 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGA4Q9Y5G9 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDHGA4Q9Y5G9 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGA4Q9Y5G9 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
PCDHGA4Q9Y5G9 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGA4Q9Y5G9 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGA4Q9Y5G9 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.68■□□□□ 0.9
PCDHGA4Q9Y5G9 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGA4Q9Y5G9 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGA4Q9Y5G9 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGA4Q9Y5G9 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGA4Q9Y5G9 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGA4Q9Y5G9 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGA4Q9Y5G9 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.68■□□□□ 0.9
PCDHGA4Q9Y5G9 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.68■□□□□ 0.9
PCDHGA4Q9Y5G9 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.68■□□□□ 0.9
PCDHGA4Q9Y5G9 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGA4Q9Y5G9 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGA4Q9Y5G9 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGA4Q9Y5G9 AC004854.2-201ENST00000608450 1441 ntBASIC20.68■□□□□ 0.9
PCDHGA4Q9Y5G9 AP004607.4-201ENST00000530158 1459 ntBASIC20.68■□□□□ 0.9
PCDHGA4Q9Y5G9 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGA4Q9Y5G9 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGA4Q9Y5G9 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
PCDHGA4Q9Y5G9 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGA4Q9Y5G9 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.67■□□□□ 0.9
PCDHGA4Q9Y5G9 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGA4Q9Y5G9 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGA4Q9Y5G9 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGA4Q9Y5G9 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.67■□□□□ 0.9
PCDHGA4Q9Y5G9 AL355802.2-201ENST00000402069 882 ntBASIC20.67■□□□□ 0.9
PCDHGA4Q9Y5G9 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.67■□□□□ 0.9
PCDHGA4Q9Y5G9 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.67■□□□□ 0.9
PCDHGA4Q9Y5G9 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.67■□□□□ 0.9
PCDHGA4Q9Y5G9 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGA4Q9Y5G9 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGA4Q9Y5G9 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGA4Q9Y5G9 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGA4Q9Y5G9 ECEL1P1-201ENST00000373592 1742 ntBASIC20.67■□□□□ 0.9
PCDHGA4Q9Y5G9 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGA4Q9Y5G9 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDHGA4Q9Y5G9 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGA4Q9Y5G9 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGA4Q9Y5G9 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGA4Q9Y5G9 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGA4Q9Y5G9 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGA4Q9Y5G9 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.66■□□□□ 0.9
PCDHGA4Q9Y5G9 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGA4Q9Y5G9 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGA4Q9Y5G9 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGA4Q9Y5G9 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGA4Q9Y5G9 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDHGA4Q9Y5G9 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
PCDHGA4Q9Y5G9 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.66■□□□□ 0.9
PCDHGA4Q9Y5G9 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGA4Q9Y5G9 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGA4Q9Y5G9 EP400NL-214ENST00000641289 2402 ntBASIC20.65■□□□□ 0.9
PCDHGA4Q9Y5G9 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
PCDHGA4Q9Y5G9 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.65■□□□□ 0.9
PCDHGA4Q9Y5G9 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
PCDHGA4Q9Y5G9 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGA4Q9Y5G9 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDHGA4Q9Y5G9 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDHGA4Q9Y5G9 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
PCDHGA4Q9Y5G9 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PCDHGA4Q9Y5G9 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.65■□□□□ 0.9
PCDHGA4Q9Y5G9 AL109923.1-201ENST00000618799 583 ntBASIC20.65■□□□□ 0.9
PCDHGA4Q9Y5G9 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 228.8 ms