Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.71■□□□□ 0.75
PCDHGA9Q9Y5G4 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.71■□□□□ 0.75
PCDHGA9Q9Y5G4 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDHGA9Q9Y5G4 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA9Q9Y5G4 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA9Q9Y5G4 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA9Q9Y5G4 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA9Q9Y5G4 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA9Q9Y5G4 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA9Q9Y5G4 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.7■□□□□ 0.74
PCDHGA9Q9Y5G4 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.7■□□□□ 0.74
PCDHGA9Q9Y5G4 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHGA9Q9Y5G4 TERF1P5-201ENST00000477545 1207 ntBASIC19.7■□□□□ 0.74
PCDHGA9Q9Y5G4 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHGA9Q9Y5G4 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PCDHGA9Q9Y5G4 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
PCDHGA9Q9Y5G4 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA9Q9Y5G4 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA9Q9Y5G4 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA9Q9Y5G4 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA9Q9Y5G4 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA9Q9Y5G4 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGA9Q9Y5G4 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGA9Q9Y5G4 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
PCDHGA9Q9Y5G4 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGA9Q9Y5G4 LINC01960-201ENST00000563759 1884 ntBASIC19.69■□□□□ 0.74
PCDHGA9Q9Y5G4 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDHGA9Q9Y5G4 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.69■□□□□ 0.74
PCDHGA9Q9Y5G4 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGA9Q9Y5G4 AC007322.4-201ENST00000509611 723 ntBASIC19.69■□□□□ 0.74
PCDHGA9Q9Y5G4 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.69■□□□□ 0.74
PCDHGA9Q9Y5G4 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGA9Q9Y5G4 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDHGA9Q9Y5G4 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PCDHGA9Q9Y5G4 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDHGA9Q9Y5G4 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDHGA9Q9Y5G4 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGA9Q9Y5G4 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.69■□□□□ 0.74
PCDHGA9Q9Y5G4 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA9Q9Y5G4 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA9Q9Y5G4 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDHGA9Q9Y5G4 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA9Q9Y5G4 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PCDHGA9Q9Y5G4 AC007375.3-201ENST00000600936 2314 ntBASIC19.68■□□□□ 0.74
PCDHGA9Q9Y5G4 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA9Q9Y5G4 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA9Q9Y5G4 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.68■□□□□ 0.74
PCDHGA9Q9Y5G4 EEF1DP3-203ENST00000566025 782 ntBASIC19.68■□□□□ 0.74
PCDHGA9Q9Y5G4 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.68■□□□□ 0.74
PCDHGA9Q9Y5G4 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA9Q9Y5G4 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
PCDHGA9Q9Y5G4 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA9Q9Y5G4 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA9Q9Y5G4 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.68■□□□□ 0.74
PCDHGA9Q9Y5G4 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA9Q9Y5G4 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA9Q9Y5G4 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA9Q9Y5G4 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.68■□□□□ 0.74
PCDHGA9Q9Y5G4 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA9Q9Y5G4 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.67■□□□□ 0.74
PCDHGA9Q9Y5G4 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA9Q9Y5G4 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA9Q9Y5G4 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA9Q9Y5G4 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA9Q9Y5G4 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.67■□□□□ 0.74
PCDHGA9Q9Y5G4 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDHGA9Q9Y5G4 AC053503.5-201ENST00000601508 636 ntBASIC19.67■□□□□ 0.74
PCDHGA9Q9Y5G4 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDHGA9Q9Y5G4 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PCDHGA9Q9Y5G4 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA9Q9Y5G4 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA9Q9Y5G4 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGA9Q9Y5G4 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
PCDHGA9Q9Y5G4 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGA9Q9Y5G4 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGA9Q9Y5G4 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
PCDHGA9Q9Y5G4 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGA9Q9Y5G4 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGA9Q9Y5G4 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGA9Q9Y5G4 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.66■□□□□ 0.74
PCDHGA9Q9Y5G4 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGA9Q9Y5G4 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGA9Q9Y5G4 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDHGA9Q9Y5G4 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDHGA9Q9Y5G4 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGA9Q9Y5G4 OR10C1-204ENST00000622521 1039 ntBASIC19.66■□□□□ 0.74
PCDHGA9Q9Y5G4 OR7E47P-201ENST00000546390 1422 ntBASIC19.66■□□□□ 0.74
PCDHGA9Q9Y5G4 AC068338.2-201ENST00000563278 1430 ntBASIC19.66■□□□□ 0.74
PCDHGA9Q9Y5G4 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDHGA9Q9Y5G4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA9Q9Y5G4 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGA9Q9Y5G4 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDHGA9Q9Y5G4 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.65■□□□□ 0.74
PCDHGA9Q9Y5G4 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.65■□□□□ 0.74
PCDHGA9Q9Y5G4 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.65■□□□□ 0.74
PCDHGA9Q9Y5G4 CYP2T1P-201ENST00000432607 1285 ntBASIC19.65■□□□□ 0.74
PCDHGA9Q9Y5G4 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.65■□□□□ 0.74
PCDHGA9Q9Y5G4 AC098934.4-201ENST00000564127 592 ntBASIC19.65■□□□□ 0.74
PCDHGA9Q9Y5G4 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
PCDHGA9Q9Y5G4 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms