Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.33■■□□□ 1.01
PCDHGC4Q9Y5F7 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.33■■□□□ 1.01
PCDHGC4Q9Y5F7 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.33■■□□□ 1.01
PCDHGC4Q9Y5F7 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
PCDHGC4Q9Y5F7 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
PCDHGC4Q9Y5F7 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PCDHGC4Q9Y5F7 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.33■■□□□ 1
PCDHGC4Q9Y5F7 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
PCDHGC4Q9Y5F7 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.33■■□□□ 1
PCDHGC4Q9Y5F7 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.33■■□□□ 1
PCDHGC4Q9Y5F7 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
PCDHGC4Q9Y5F7 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHGC4Q9Y5F7 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHGC4Q9Y5F7 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHGC4Q9Y5F7 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHGC4Q9Y5F7 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCDHGC4Q9Y5F7 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCDHGC4Q9Y5F7 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.32■■□□□ 1
PCDHGC4Q9Y5F7 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.32■■□□□ 1
PCDHGC4Q9Y5F7 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHGC4Q9Y5F7 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHGC4Q9Y5F7 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHGC4Q9Y5F7 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.31■■□□□ 1
PCDHGC4Q9Y5F7 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHGC4Q9Y5F7 AC244015.2-201ENST00000616358 1861 ntBASIC21.31■■□□□ 1
PCDHGC4Q9Y5F7 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
PCDHGC4Q9Y5F7 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHGC4Q9Y5F7 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHGC4Q9Y5F7 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCDHGC4Q9Y5F7 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.31■■□□□ 1
PCDHGC4Q9Y5F7 AC010141.2-201ENST00000452426 721 ntBASIC21.31■■□□□ 1
PCDHGC4Q9Y5F7 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.31■■□□□ 1
PCDHGC4Q9Y5F7 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.31■■□□□ 1
PCDHGC4Q9Y5F7 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.31■■□□□ 1
PCDHGC4Q9Y5F7 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.31■■□□□ 1
PCDHGC4Q9Y5F7 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHGC4Q9Y5F7 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
PCDHGC4Q9Y5F7 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHGC4Q9Y5F7 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDHGC4Q9Y5F7 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDHGC4Q9Y5F7 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.3■■□□□ 1
PCDHGC4Q9Y5F7 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.3■■□□□ 1
PCDHGC4Q9Y5F7 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.3■■□□□ 1
PCDHGC4Q9Y5F7 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.3■■□□□ 1
PCDHGC4Q9Y5F7 IKBKGP1-201ENST00000612193 1073 ntBASIC21.3■■□□□ 1
PCDHGC4Q9Y5F7 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHGC4Q9Y5F7 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.29■■□□□ 1
PCDHGC4Q9Y5F7 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.29■■□□□ 1
PCDHGC4Q9Y5F7 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHGC4Q9Y5F7 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.29■■□□□ 1
PCDHGC4Q9Y5F7 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
PCDHGC4Q9Y5F7 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.29■■□□□ 1
PCDHGC4Q9Y5F7 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHGC4Q9Y5F7 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.29■■□□□ 1
PCDHGC4Q9Y5F7 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.29■■□□□ 1
PCDHGC4Q9Y5F7 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.29■■□□□ 1
PCDHGC4Q9Y5F7 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHGC4Q9Y5F7 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.29■■□□□ 1
PCDHGC4Q9Y5F7 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.29■■□□□ 1
PCDHGC4Q9Y5F7 AC137761.2-201ENST00000561729 223 ntBASIC21.29■■□□□ 1
PCDHGC4Q9Y5F7 AC145350.3-201ENST00000569033 163 ntBASIC21.29■■□□□ 1
PCDHGC4Q9Y5F7 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHGC4Q9Y5F7 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCDHGC4Q9Y5F7 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCDHGC4Q9Y5F7 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHGC4Q9Y5F7 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHGC4Q9Y5F7 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.28■■□□□ 1
PCDHGC4Q9Y5F7 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHGC4Q9Y5F7 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHGC4Q9Y5F7 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
PCDHGC4Q9Y5F7 AC061975.6-201ENST00000579045 1553 ntBASIC21.28■■□□□ 1
PCDHGC4Q9Y5F7 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHGC4Q9Y5F7 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHGC4Q9Y5F7 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHGC4Q9Y5F7 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHGC4Q9Y5F7 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHGC4Q9Y5F7 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.28■■□□□ 1
PCDHGC4Q9Y5F7 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.28■■□□□ 1
PCDHGC4Q9Y5F7 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.28■■□□□ 1
PCDHGC4Q9Y5F7 AC092666.2-201ENST00000613287 246 ntBASIC21.28■■□□□ 1
PCDHGC4Q9Y5F7 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.28■■□□□ 1
PCDHGC4Q9Y5F7 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHGC4Q9Y5F7 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.28■■□□□ 1
PCDHGC4Q9Y5F7 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHGC4Q9Y5F7 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.27■■□□□ 1
PCDHGC4Q9Y5F7 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHGC4Q9Y5F7 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHGC4Q9Y5F7 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHGC4Q9Y5F7 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHGC4Q9Y5F7 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHGC4Q9Y5F7 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.27■■□□□ 1
PCDHGC4Q9Y5F7 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.27■■□□□ 1
PCDHGC4Q9Y5F7 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHGC4Q9Y5F7 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.27■■□□□ 1
PCDHGC4Q9Y5F7 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHGC4Q9Y5F7 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.27■■□□□ 1
PCDHGC4Q9Y5F7 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PCDHGC4Q9Y5F7 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
PCDHGC4Q9Y5F7 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGC4Q9Y5F7 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms