Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.55■□□□□ 0.4
CDC42EP3Q9UKI2 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDC42EP3Q9UKI2 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDC42EP3Q9UKI2 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDC42EP3Q9UKI2 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.55■□□□□ 0.4
CDC42EP3Q9UKI2 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDC42EP3Q9UKI2 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDC42EP3Q9UKI2 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDC42EP3Q9UKI2 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.55■□□□□ 0.4
CDC42EP3Q9UKI2 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.55■□□□□ 0.4
CDC42EP3Q9UKI2 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
CDC42EP3Q9UKI2 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC17.55■□□□□ 0.4
CDC42EP3Q9UKI2 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDC42EP3Q9UKI2 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDC42EP3Q9UKI2 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC17.55■□□□□ 0.4
CDC42EP3Q9UKI2 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.55■□□□□ 0.4
CDC42EP3Q9UKI2 MKRN4P-201ENST00000444706 1521 ntBASIC17.55■□□□□ 0.4
CDC42EP3Q9UKI2 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDC42EP3Q9UKI2 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDC42EP3Q9UKI2 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CDC42EP3Q9UKI2 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDC42EP3Q9UKI2 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.55■□□□□ 0.4
CDC42EP3Q9UKI2 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDC42EP3Q9UKI2 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDC42EP3Q9UKI2 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDC42EP3Q9UKI2 LINC00526-201ENST00000581067 1875 ntBASIC17.54■□□□□ 0.4
CDC42EP3Q9UKI2 AC079630.1-202ENST00000618127 1840 ntBASIC17.54■□□□□ 0.4
CDC42EP3Q9UKI2 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
CDC42EP3Q9UKI2 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDC42EP3Q9UKI2 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDC42EP3Q9UKI2 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDC42EP3Q9UKI2 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.54■□□□□ 0.4
CDC42EP3Q9UKI2 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDC42EP3Q9UKI2 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.54■□□□□ 0.4
CDC42EP3Q9UKI2 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CDC42EP3Q9UKI2 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDC42EP3Q9UKI2 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDC42EP3Q9UKI2 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDC42EP3Q9UKI2 ANOS2P-203ENST00000472227 1816 ntBASIC17.54■□□□□ 0.4
CDC42EP3Q9UKI2 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.53■□□□□ 0.4
CDC42EP3Q9UKI2 DUSP8P3-201ENST00000399571 1760 ntBASIC17.53■□□□□ 0.4
CDC42EP3Q9UKI2 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CDC42EP3Q9UKI2 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDC42EP3Q9UKI2 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDC42EP3Q9UKI2 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDC42EP3Q9UKI2 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDC42EP3Q9UKI2 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
CDC42EP3Q9UKI2 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDC42EP3Q9UKI2 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDC42EP3Q9UKI2 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC17.53■□□□□ 0.4
CDC42EP3Q9UKI2 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDC42EP3Q9UKI2 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDC42EP3Q9UKI2 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.53■□□□□ 0.4
CDC42EP3Q9UKI2 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CDC42EP3Q9UKI2 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDC42EP3Q9UKI2 MIPEPP3-201ENST00000412105 444 ntBASIC17.53■□□□□ 0.4
CDC42EP3Q9UKI2 AC010141.2-201ENST00000452426 721 ntBASIC17.53■□□□□ 0.4
CDC42EP3Q9UKI2 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDC42EP3Q9UKI2 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDC42EP3Q9UKI2 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.53■□□□□ 0.4
CDC42EP3Q9UKI2 AC008694.1-202ENST00000636953 945 ntBASIC17.53■□□□□ 0.4
CDC42EP3Q9UKI2 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDC42EP3Q9UKI2 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDC42EP3Q9UKI2 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC17.53■□□□□ 0.4
CDC42EP3Q9UKI2 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CDC42EP3Q9UKI2 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDC42EP3Q9UKI2 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.52■□□□□ 0.4
CDC42EP3Q9UKI2 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDC42EP3Q9UKI2 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDC42EP3Q9UKI2 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDC42EP3Q9UKI2 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDC42EP3Q9UKI2 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDC42EP3Q9UKI2 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDC42EP3Q9UKI2 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDC42EP3Q9UKI2 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDC42EP3Q9UKI2 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.52■□□□□ 0.4
CDC42EP3Q9UKI2 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CDC42EP3Q9UKI2 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.52■□□□□ 0.4
CDC42EP3Q9UKI2 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDC42EP3Q9UKI2 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.52■□□□□ 0.4
CDC42EP3Q9UKI2 AC138907.5-202ENST00000569484 235 ntBASIC17.52■□□□□ 0.4
CDC42EP3Q9UKI2 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
CDC42EP3Q9UKI2 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDC42EP3Q9UKI2 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.52■□□□□ 0.4
CDC42EP3Q9UKI2 OR10C1-204ENST00000622521 1039 ntBASIC17.52■□□□□ 0.4
CDC42EP3Q9UKI2 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDC42EP3Q9UKI2 AC137767.1-201ENST00000602918 1920 ntBASIC17.52■□□□□ 0.4
CDC42EP3Q9UKI2 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
CDC42EP3Q9UKI2 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDC42EP3Q9UKI2 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDC42EP3Q9UKI2 AC092068.2-201ENST00000590491 1708 ntBASIC17.52■□□□□ 0.39
CDC42EP3Q9UKI2 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDC42EP3Q9UKI2 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDC42EP3Q9UKI2 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.52■□□□□ 0.39
CDC42EP3Q9UKI2 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.52■□□□□ 0.39
CDC42EP3Q9UKI2 AL353803.4-201ENST00000565882 1934 ntBASIC17.51■□□□□ 0.39
CDC42EP3Q9UKI2 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDC42EP3Q9UKI2 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.51■□□□□ 0.39
CDC42EP3Q9UKI2 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDC42EP3Q9UKI2 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms