Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
VTI1BQ9UEU0 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.7■□□□□ 0.9
VTI1BQ9UEU0 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.69■□□□□ 0.9
VTI1BQ9UEU0 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.69■□□□□ 0.9
VTI1BQ9UEU0 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VTI1BQ9UEU0 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VTI1BQ9UEU0 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.69■□□□□ 0.9
VTI1BQ9UEU0 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VTI1BQ9UEU0 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.69■□□□□ 0.9
VTI1BQ9UEU0 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.69■□□□□ 0.9
VTI1BQ9UEU0 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.69■□□□□ 0.9
VTI1BQ9UEU0 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.69■□□□□ 0.9
VTI1BQ9UEU0 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
VTI1BQ9UEU0 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
VTI1BQ9UEU0 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VTI1BQ9UEU0 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
VTI1BQ9UEU0 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VTI1BQ9UEU0 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
VTI1BQ9UEU0 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.69■□□□□ 0.9
VTI1BQ9UEU0 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
VTI1BQ9UEU0 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VTI1BQ9UEU0 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VTI1BQ9UEU0 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VTI1BQ9UEU0 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VTI1BQ9UEU0 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
VTI1BQ9UEU0 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.68■□□□□ 0.9
VTI1BQ9UEU0 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
VTI1BQ9UEU0 AL031432.3-201ENST00000607698 485 ntBASIC20.68■□□□□ 0.9
VTI1BQ9UEU0 AC005837.3-201ENST00000612163 286 ntBASIC20.68■□□□□ 0.9
VTI1BQ9UEU0 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.68■□□□□ 0.9
VTI1BQ9UEU0 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
VTI1BQ9UEU0 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VTI1BQ9UEU0 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VTI1BQ9UEU0 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VTI1BQ9UEU0 FEM1AP1-201ENST00000431297 1995 ntBASIC20.68■□□□□ 0.9
VTI1BQ9UEU0 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VTI1BQ9UEU0 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VTI1BQ9UEU0 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VTI1BQ9UEU0 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
VTI1BQ9UEU0 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
VTI1BQ9UEU0 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VTI1BQ9UEU0 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VTI1BQ9UEU0 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VTI1BQ9UEU0 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
VTI1BQ9UEU0 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.67■□□□□ 0.9
VTI1BQ9UEU0 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
VTI1BQ9UEU0 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
VTI1BQ9UEU0 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
VTI1BQ9UEU0 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.67■□□□□ 0.9
VTI1BQ9UEU0 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.67■□□□□ 0.9
VTI1BQ9UEU0 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VTI1BQ9UEU0 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
VTI1BQ9UEU0 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
VTI1BQ9UEU0 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VTI1BQ9UEU0 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.66■□□□□ 0.9
VTI1BQ9UEU0 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VTI1BQ9UEU0 LINC01006-201ENST00000333319 2292 ntBASIC20.66■□□□□ 0.9
VTI1BQ9UEU0 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
VTI1BQ9UEU0 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
VTI1BQ9UEU0 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.66■□□□□ 0.9
VTI1BQ9UEU0 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.66■□□□□ 0.9
VTI1BQ9UEU0 SUDS3P1-201ENST00000505831 966 ntBASIC20.66■□□□□ 0.9
VTI1BQ9UEU0 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.66■□□□□ 0.9
VTI1BQ9UEU0 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.66■□□□□ 0.9
VTI1BQ9UEU0 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
VTI1BQ9UEU0 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
VTI1BQ9UEU0 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VTI1BQ9UEU0 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VTI1BQ9UEU0 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
VTI1BQ9UEU0 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VTI1BQ9UEU0 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VTI1BQ9UEU0 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
VTI1BQ9UEU0 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VTI1BQ9UEU0 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
VTI1BQ9UEU0 BX842568.3-201ENST00000418104 571 ntBASIC20.65■□□□□ 0.9
VTI1BQ9UEU0 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.65■□□□□ 0.9
VTI1BQ9UEU0 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
VTI1BQ9UEU0 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
VTI1BQ9UEU0 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
VTI1BQ9UEU0 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
VTI1BQ9UEU0 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
VTI1BQ9UEU0 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
VTI1BQ9UEU0 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VTI1BQ9UEU0 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VTI1BQ9UEU0 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VTI1BQ9UEU0 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
VTI1BQ9UEU0 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.64■□□□□ 0.89
VTI1BQ9UEU0 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
VTI1BQ9UEU0 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
VTI1BQ9UEU0 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
VTI1BQ9UEU0 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.64■□□□□ 0.89
VTI1BQ9UEU0 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.64■□□□□ 0.89
VTI1BQ9UEU0 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VTI1BQ9UEU0 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.64■□□□□ 0.89
VTI1BQ9UEU0 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
VTI1BQ9UEU0 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VTI1BQ9UEU0 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
VTI1BQ9UEU0 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VTI1BQ9UEU0 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VTI1BQ9UEU0 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms