Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
LRFN1Q9P244 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.36■□□□□ 0.69
LRFN1Q9P244 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.36■□□□□ 0.69
LRFN1Q9P244 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRFN1Q9P244 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRFN1Q9P244 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
LRFN1Q9P244 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
LRFN1Q9P244 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRFN1Q9P244 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
LRFN1Q9P244 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.35■□□□□ 0.69
LRFN1Q9P244 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
LRFN1Q9P244 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRFN1Q9P244 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LRFN1Q9P244 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRFN1Q9P244 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LRFN1Q9P244 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LRFN1Q9P244 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LRFN1Q9P244 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRFN1Q9P244 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRFN1Q9P244 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LRFN1Q9P244 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
LRFN1Q9P244 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LRFN1Q9P244 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRFN1Q9P244 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRFN1Q9P244 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.34■□□□□ 0.69
LRFN1Q9P244 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.34■□□□□ 0.69
LRFN1Q9P244 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRFN1Q9P244 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
LRFN1Q9P244 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.34■□□□□ 0.69
LRFN1Q9P244 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.34■□□□□ 0.69
LRFN1Q9P244 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
LRFN1Q9P244 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.34■□□□□ 0.69
LRFN1Q9P244 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LRFN1Q9P244 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LRFN1Q9P244 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRFN1Q9P244 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.34■□□□□ 0.69
LRFN1Q9P244 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
LRFN1Q9P244 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LRFN1Q9P244 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.33■□□□□ 0.69
LRFN1Q9P244 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LRFN1Q9P244 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
LRFN1Q9P244 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
LRFN1Q9P244 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
LRFN1Q9P244 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.33■□□□□ 0.68
LRFN1Q9P244 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.33■□□□□ 0.68
LRFN1Q9P244 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LRFN1Q9P244 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.33■□□□□ 0.68
LRFN1Q9P244 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.33■□□□□ 0.68
LRFN1Q9P244 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.33■□□□□ 0.68
LRFN1Q9P244 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
LRFN1Q9P244 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
LRFN1Q9P244 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRFN1Q9P244 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.33■□□□□ 0.68
LRFN1Q9P244 KRT16P2-201ENST00000414673 1423 ntBASIC19.33■□□□□ 0.68
LRFN1Q9P244 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRFN1Q9P244 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.33■□□□□ 0.68
LRFN1Q9P244 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRFN1Q9P244 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.32■□□□□ 0.68
LRFN1Q9P244 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
LRFN1Q9P244 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRFN1Q9P244 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRFN1Q9P244 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRFN1Q9P244 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.32■□□□□ 0.68
LRFN1Q9P244 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
LRFN1Q9P244 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRFN1Q9P244 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRFN1Q9P244 SLC29A4P1-201ENST00000398760 971 ntBASIC19.32■□□□□ 0.68
LRFN1Q9P244 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.32■□□□□ 0.68
LRFN1Q9P244 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.32■□□□□ 0.68
LRFN1Q9P244 TSPY6P-201ENST00000448518 926 ntBASIC19.32■□□□□ 0.68
LRFN1Q9P244 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.32■□□□□ 0.68
LRFN1Q9P244 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.32■□□□□ 0.68
LRFN1Q9P244 AF201337.1-201ENST00000520239 748 ntBASIC19.32■□□□□ 0.68
LRFN1Q9P244 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
LRFN1Q9P244 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
LRFN1Q9P244 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
LRFN1Q9P244 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRFN1Q9P244 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRFN1Q9P244 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.32■□□□□ 0.68
LRFN1Q9P244 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRFN1Q9P244 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
LRFN1Q9P244 AC061975.6-201ENST00000579045 1553 ntBASIC19.32■□□□□ 0.68
LRFN1Q9P244 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRFN1Q9P244 AC026471.6-201ENST00000622954 1905 ntBASIC19.31■□□□□ 0.68
LRFN1Q9P244 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRFN1Q9P244 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.31■□□□□ 0.68
LRFN1Q9P244 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRFN1Q9P244 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRFN1Q9P244 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
LRFN1Q9P244 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
LRFN1Q9P244 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRFN1Q9P244 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRFN1Q9P244 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.31■□□□□ 0.68
LRFN1Q9P244 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.31■□□□□ 0.68
LRFN1Q9P244 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRFN1Q9P244 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.31■□□□□ 0.68
LRFN1Q9P244 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
LRFN1Q9P244 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRFN1Q9P244 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
LRFN1Q9P244 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms