Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.92■□□□□ 0.78
VAPAQ9P0L0 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.92■□□□□ 0.78
VAPAQ9P0L0 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.92■□□□□ 0.78
VAPAQ9P0L0 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.92■□□□□ 0.78
VAPAQ9P0L0 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.92■□□□□ 0.78
VAPAQ9P0L0 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VAPAQ9P0L0 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
VAPAQ9P0L0 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.92■□□□□ 0.78
VAPAQ9P0L0 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.92■□□□□ 0.78
VAPAQ9P0L0 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
VAPAQ9P0L0 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VAPAQ9P0L0 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VAPAQ9P0L0 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
VAPAQ9P0L0 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
VAPAQ9P0L0 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.92■□□□□ 0.78
VAPAQ9P0L0 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
VAPAQ9P0L0 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VAPAQ9P0L0 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.91■□□□□ 0.78
VAPAQ9P0L0 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
VAPAQ9P0L0 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.91■□□□□ 0.78
VAPAQ9P0L0 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VAPAQ9P0L0 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VAPAQ9P0L0 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VAPAQ9P0L0 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VAPAQ9P0L0 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VAPAQ9P0L0 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
VAPAQ9P0L0 AL356441.2-201ENST00000443009 864 ntBASIC19.91■□□□□ 0.78
VAPAQ9P0L0 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.91■□□□□ 0.78
VAPAQ9P0L0 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.91■□□□□ 0.78
VAPAQ9P0L0 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VAPAQ9P0L0 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.91■□□□□ 0.78
VAPAQ9P0L0 PLK5-205ENST00000642079 1969 ntBASIC19.91■□□□□ 0.78
VAPAQ9P0L0 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VAPAQ9P0L0 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.91■□□□□ 0.78
VAPAQ9P0L0 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.91■□□□□ 0.78
VAPAQ9P0L0 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VAPAQ9P0L0 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VAPAQ9P0L0 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VAPAQ9P0L0 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VAPAQ9P0L0 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VAPAQ9P0L0 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
VAPAQ9P0L0 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VAPAQ9P0L0 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VAPAQ9P0L0 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
VAPAQ9P0L0 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.9■□□□□ 0.78
VAPAQ9P0L0 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
VAPAQ9P0L0 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
VAPAQ9P0L0 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.9■□□□□ 0.78
VAPAQ9P0L0 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.9■□□□□ 0.78
VAPAQ9P0L0 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
VAPAQ9P0L0 AC006128.1-201ENST00000624704 1661 ntBASIC19.9■□□□□ 0.78
VAPAQ9P0L0 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VAPAQ9P0L0 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VAPAQ9P0L0 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
VAPAQ9P0L0 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.78
VAPAQ9P0L0 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
VAPAQ9P0L0 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
VAPAQ9P0L0 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.89■□□□□ 0.77
VAPAQ9P0L0 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VAPAQ9P0L0 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VAPAQ9P0L0 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VAPAQ9P0L0 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.89■□□□□ 0.77
VAPAQ9P0L0 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
VAPAQ9P0L0 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.89■□□□□ 0.77
VAPAQ9P0L0 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.89■□□□□ 0.77
VAPAQ9P0L0 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.89■□□□□ 0.77
VAPAQ9P0L0 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.89■□□□□ 0.77
VAPAQ9P0L0 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.89■□□□□ 0.77
VAPAQ9P0L0 SMUG1P1-201ENST00000590640 811 ntBASIC19.89■□□□□ 0.77
VAPAQ9P0L0 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VAPAQ9P0L0 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
VAPAQ9P0L0 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VAPAQ9P0L0 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.88■□□□□ 0.77
VAPAQ9P0L0 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
VAPAQ9P0L0 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
VAPAQ9P0L0 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
VAPAQ9P0L0 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.88■□□□□ 0.77
VAPAQ9P0L0 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.88■□□□□ 0.77
VAPAQ9P0L0 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
VAPAQ9P0L0 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
VAPAQ9P0L0 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
VAPAQ9P0L0 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
VAPAQ9P0L0 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
VAPAQ9P0L0 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
VAPAQ9P0L0 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VAPAQ9P0L0 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
VAPAQ9P0L0 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.88■□□□□ 0.77
VAPAQ9P0L0 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VAPAQ9P0L0 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.87■□□□□ 0.77
VAPAQ9P0L0 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VAPAQ9P0L0 AC073314.1-201ENST00000568729 2216 ntBASIC19.87■□□□□ 0.77
VAPAQ9P0L0 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
VAPAQ9P0L0 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
VAPAQ9P0L0 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.87■□□□□ 0.77
VAPAQ9P0L0 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VAPAQ9P0L0 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
VAPAQ9P0L0 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.87■□□□□ 0.77
VAPAQ9P0L0 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.87■□□□□ 0.77
VAPAQ9P0L0 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.87■□□□□ 0.77
VAPAQ9P0L0 AC131281.2-201ENST00000520478 145 ntBASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms