Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
NDE1Q9NXR1 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NDE1Q9NXR1 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NDE1Q9NXR1 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
NDE1Q9NXR1 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
NDE1Q9NXR1 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NDE1Q9NXR1 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.35■□□□□ 0.85
NDE1Q9NXR1 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NDE1Q9NXR1 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
NDE1Q9NXR1 AFG3L1P-217ENST00000557444 2447 ntBASIC20.35■□□□□ 0.85
NDE1Q9NXR1 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.35■□□□□ 0.85
NDE1Q9NXR1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.35■□□□□ 0.85
NDE1Q9NXR1 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NDE1Q9NXR1 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NDE1Q9NXR1 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.34■□□□□ 0.85
NDE1Q9NXR1 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NDE1Q9NXR1 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
NDE1Q9NXR1 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
NDE1Q9NXR1 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NDE1Q9NXR1 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NDE1Q9NXR1 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.34■□□□□ 0.85
NDE1Q9NXR1 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NDE1Q9NXR1 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
NDE1Q9NXR1 AC010980.1-201ENST00000587192 1142 ntBASIC20.34■□□□□ 0.85
NDE1Q9NXR1 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.34■□□□□ 0.85
NDE1Q9NXR1 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.34■□□□□ 0.85
NDE1Q9NXR1 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
NDE1Q9NXR1 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NDE1Q9NXR1 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NDE1Q9NXR1 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NDE1Q9NXR1 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
NDE1Q9NXR1 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
NDE1Q9NXR1 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NDE1Q9NXR1 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
NDE1Q9NXR1 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
NDE1Q9NXR1 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
NDE1Q9NXR1 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NDE1Q9NXR1 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NDE1Q9NXR1 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
NDE1Q9NXR1 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.33■□□□□ 0.85
NDE1Q9NXR1 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
NDE1Q9NXR1 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.33■□□□□ 0.85
NDE1Q9NXR1 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NDE1Q9NXR1 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.33■□□□□ 0.85
NDE1Q9NXR1 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
NDE1Q9NXR1 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.33■□□□□ 0.85
NDE1Q9NXR1 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NDE1Q9NXR1 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NDE1Q9NXR1 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
NDE1Q9NXR1 AC087289.5-201ENST00000586076 3175 ntBASIC20.33■□□□□ 0.84
NDE1Q9NXR1 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
NDE1Q9NXR1 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NDE1Q9NXR1 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
NDE1Q9NXR1 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
NDE1Q9NXR1 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
NDE1Q9NXR1 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.32■□□□□ 0.84
NDE1Q9NXR1 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.32■□□□□ 0.84
NDE1Q9NXR1 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NDE1Q9NXR1 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
NDE1Q9NXR1 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NDE1Q9NXR1 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NDE1Q9NXR1 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
NDE1Q9NXR1 AL020996.1-203ENST00000536896 2307 ntBASIC20.32■□□□□ 0.84
NDE1Q9NXR1 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.32■□□□□ 0.84
NDE1Q9NXR1 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
NDE1Q9NXR1 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
NDE1Q9NXR1 AP005212.1-201ENST00000581547 1997 ntBASIC20.32■□□□□ 0.84
NDE1Q9NXR1 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
NDE1Q9NXR1 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NDE1Q9NXR1 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NDE1Q9NXR1 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
NDE1Q9NXR1 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.31■□□□□ 0.84
NDE1Q9NXR1 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.31■□□□□ 0.84
NDE1Q9NXR1 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
NDE1Q9NXR1 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NDE1Q9NXR1 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.31■□□□□ 0.84
NDE1Q9NXR1 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NDE1Q9NXR1 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NDE1Q9NXR1 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NDE1Q9NXR1 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NDE1Q9NXR1 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
NDE1Q9NXR1 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
NDE1Q9NXR1 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NDE1Q9NXR1 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
NDE1Q9NXR1 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
NDE1Q9NXR1 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NDE1Q9NXR1 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NDE1Q9NXR1 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.3■□□□□ 0.84
NDE1Q9NXR1 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.3■□□□□ 0.84
NDE1Q9NXR1 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NDE1Q9NXR1 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.3■□□□□ 0.84
NDE1Q9NXR1 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NDE1Q9NXR1 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NDE1Q9NXR1 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NDE1Q9NXR1 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NDE1Q9NXR1 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.3■□□□□ 0.84
NDE1Q9NXR1 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.3■□□□□ 0.84
NDE1Q9NXR1 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
NDE1Q9NXR1 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
NDE1Q9NXR1 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms