Protein–RNA interactions for Protein: Q9NRX4

PHPT1, 14 kDa phosphohistidine phosphatase, humanhuman

Predicted RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHPT1Q9NRX4 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PHPT1Q9NRX4 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.83■□□□□ 0.93
PHPT1Q9NRX4 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PHPT1Q9NRX4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.83■□□□□ 0.93
PHPT1Q9NRX4 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.83■□□□□ 0.93
PHPT1Q9NRX4 ID1-201ENST00000376105 1233 ntBASIC20.83■□□□□ 0.93
PHPT1Q9NRX4 MIR663A-201ENST00000385250 93 ntBASIC20.83■□□□□ 0.93
PHPT1Q9NRX4 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.83■□□□□ 0.93
PHPT1Q9NRX4 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.83■□□□□ 0.93
PHPT1Q9NRX4 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.83■□□□□ 0.93
PHPT1Q9NRX4 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.83■□□□□ 0.93
PHPT1Q9NRX4 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.83■□□□□ 0.93
PHPT1Q9NRX4 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.83■□□□□ 0.93
PHPT1Q9NRX4 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
PHPT1Q9NRX4 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
PHPT1Q9NRX4 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PHPT1Q9NRX4 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PHPT1Q9NRX4 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PHPT1Q9NRX4 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PHPT1Q9NRX4 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.82■□□□□ 0.92
PHPT1Q9NRX4 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PHPT1Q9NRX4 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PHPT1Q9NRX4 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PHPT1Q9NRX4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PHPT1Q9NRX4 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PHPT1Q9NRX4 AC061975.6-201ENST00000579045 1553 ntBASIC20.82■□□□□ 0.92
PHPT1Q9NRX4 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PHPT1Q9NRX4 CROCCP5-201ENST00000436658 830 ntBASIC20.82■□□□□ 0.92
PHPT1Q9NRX4 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PHPT1Q9NRX4 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.82■□□□□ 0.92
PHPT1Q9NRX4 TERF1P5-201ENST00000477545 1207 ntBASIC20.82■□□□□ 0.92
PHPT1Q9NRX4 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
PHPT1Q9NRX4 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.82■□□□□ 0.92
PHPT1Q9NRX4 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
PHPT1Q9NRX4 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.82■□□□□ 0.92
PHPT1Q9NRX4 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PHPT1Q9NRX4 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PHPT1Q9NRX4 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PHPT1Q9NRX4 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PHPT1Q9NRX4 AC012676.1-201ENST00000574705 1949 ntBASIC20.81■□□□□ 0.92
PHPT1Q9NRX4 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PHPT1Q9NRX4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.81■□□□□ 0.92
PHPT1Q9NRX4 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.81■□□□□ 0.92
PHPT1Q9NRX4 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.81■□□□□ 0.92
PHPT1Q9NRX4 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.81■□□□□ 0.92
PHPT1Q9NRX4 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.81■□□□□ 0.92
PHPT1Q9NRX4 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.81■□□□□ 0.92
PHPT1Q9NRX4 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.81■□□□□ 0.92
PHPT1Q9NRX4 AC013268.1-206ENST00000638368 961 ntBASIC20.81■□□□□ 0.92
PHPT1Q9NRX4 AC112229.1-201ENST00000639295 961 ntBASIC20.81■□□□□ 0.92
PHPT1Q9NRX4 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
PHPT1Q9NRX4 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PHPT1Q9NRX4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
PHPT1Q9NRX4 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PHPT1Q9NRX4 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PHPT1Q9NRX4 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PHPT1Q9NRX4 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PHPT1Q9NRX4 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.8■□□□□ 0.92
PHPT1Q9NRX4 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PHPT1Q9NRX4 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PHPT1Q9NRX4 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PHPT1Q9NRX4 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
PHPT1Q9NRX4 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
PHPT1Q9NRX4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PHPT1Q9NRX4 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PHPT1Q9NRX4 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PHPT1Q9NRX4 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.79■□□□□ 0.92
PHPT1Q9NRX4 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.79■□□□□ 0.92
PHPT1Q9NRX4 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.79■□□□□ 0.92
PHPT1Q9NRX4 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.79■□□□□ 0.92
PHPT1Q9NRX4 AC005181.1-201ENST00000604782 1256 ntBASIC20.79■□□□□ 0.92
PHPT1Q9NRX4 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PHPT1Q9NRX4 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PHPT1Q9NRX4 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PHPT1Q9NRX4 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PHPT1Q9NRX4 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PHPT1Q9NRX4 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PHPT1Q9NRX4 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
PHPT1Q9NRX4 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.78■□□□□ 0.92
PHPT1Q9NRX4 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PHPT1Q9NRX4 CNN2P6-201ENST00000439038 900 ntBASIC20.78■□□□□ 0.92
PHPT1Q9NRX4 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.78■□□□□ 0.92
PHPT1Q9NRX4 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.78■□□□□ 0.92
PHPT1Q9NRX4 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.78■□□□□ 0.92
PHPT1Q9NRX4 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PHPT1Q9NRX4 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PHPT1Q9NRX4 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
PHPT1Q9NRX4 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.78■□□□□ 0.92
PHPT1Q9NRX4 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PHPT1Q9NRX4 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PHPT1Q9NRX4 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PHPT1Q9NRX4 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.77■□□□□ 0.92
PHPT1Q9NRX4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
PHPT1Q9NRX4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
PHPT1Q9NRX4 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
PHPT1Q9NRX4 HLA-L-209ENST00000420110 1011 ntBASIC20.77■□□□□ 0.92
PHPT1Q9NRX4 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
PHPT1Q9NRX4 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PHPT1Q9NRX4 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PHPT1Q9NRX4 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms