Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SLC52A3Q9NQ40 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.01■□□□□ 0.79
SLC52A3Q9NQ40 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.01■□□□□ 0.79
SLC52A3Q9NQ40 SYT6-210ENST00000641643 1587 ntBASIC20.01■□□□□ 0.79
SLC52A3Q9NQ40 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
SLC52A3Q9NQ40 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.01■□□□□ 0.79
SLC52A3Q9NQ40 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SLC52A3Q9NQ40 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SLC52A3Q9NQ40 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.01■□□□□ 0.79
SLC52A3Q9NQ40 AC133561.4-201ENST00000566112 224 ntBASIC20.01■□□□□ 0.79
SLC52A3Q9NQ40 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.01■□□□□ 0.79
SLC52A3Q9NQ40 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.01■□□□□ 0.79
SLC52A3Q9NQ40 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
SLC52A3Q9NQ40 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
SLC52A3Q9NQ40 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC52A3Q9NQ40 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC52A3Q9NQ40 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
SLC52A3Q9NQ40 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC52A3Q9NQ40 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20■□□□□ 0.79
SLC52A3Q9NQ40 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
SLC52A3Q9NQ40 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC52A3Q9NQ40 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20■□□□□ 0.79
SLC52A3Q9NQ40 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20■□□□□ 0.79
SLC52A3Q9NQ40 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20■□□□□ 0.79
SLC52A3Q9NQ40 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
SLC52A3Q9NQ40 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20■□□□□ 0.79
SLC52A3Q9NQ40 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SLC52A3Q9NQ40 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC52A3Q9NQ40 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC52A3Q9NQ40 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC52A3Q9NQ40 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC52A3Q9NQ40 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20■□□□□ 0.79
SLC52A3Q9NQ40 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SLC52A3Q9NQ40 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC52A3Q9NQ40 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC52A3Q9NQ40 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SLC52A3Q9NQ40 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
SLC52A3Q9NQ40 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC52A3Q9NQ40 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC52A3Q9NQ40 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.99■□□□□ 0.79
SLC52A3Q9NQ40 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC52A3Q9NQ40 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC52A3Q9NQ40 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
SLC52A3Q9NQ40 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
SLC52A3Q9NQ40 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
SLC52A3Q9NQ40 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
SLC52A3Q9NQ40 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC52A3Q9NQ40 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.98■□□□□ 0.79
SLC52A3Q9NQ40 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC52A3Q9NQ40 DUX4L19-201ENST00000557448 1267 ntBASIC19.98■□□□□ 0.79
SLC52A3Q9NQ40 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
SLC52A3Q9NQ40 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SLC52A3Q9NQ40 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SLC52A3Q9NQ40 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.98■□□□□ 0.79
SLC52A3Q9NQ40 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.98■□□□□ 0.79
SLC52A3Q9NQ40 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SLC52A3Q9NQ40 AC027702.1-201ENST00000563810 1770 ntBASIC19.98■□□□□ 0.79
SLC52A3Q9NQ40 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SLC52A3Q9NQ40 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
SLC52A3Q9NQ40 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC52A3Q9NQ40 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
SLC52A3Q9NQ40 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC52A3Q9NQ40 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SLC52A3Q9NQ40 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SLC52A3Q9NQ40 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.97■□□□□ 0.79
SLC52A3Q9NQ40 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.97■□□□□ 0.79
SLC52A3Q9NQ40 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.97■□□□□ 0.79
SLC52A3Q9NQ40 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.97■□□□□ 0.79
SLC52A3Q9NQ40 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
SLC52A3Q9NQ40 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
SLC52A3Q9NQ40 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC52A3Q9NQ40 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SLC52A3Q9NQ40 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SLC52A3Q9NQ40 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC52A3Q9NQ40 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.97■□□□□ 0.79
SLC52A3Q9NQ40 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC52A3Q9NQ40 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.97■□□□□ 0.79
SLC52A3Q9NQ40 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
SLC52A3Q9NQ40 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.97■□□□□ 0.79
SLC52A3Q9NQ40 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC52A3Q9NQ40 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC52A3Q9NQ40 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC52A3Q9NQ40 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC52A3Q9NQ40 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
SLC52A3Q9NQ40 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.96■□□□□ 0.79
SLC52A3Q9NQ40 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.96■□□□□ 0.79
SLC52A3Q9NQ40 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC52A3Q9NQ40 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.96■□□□□ 0.79
SLC52A3Q9NQ40 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.96■□□□□ 0.79
SLC52A3Q9NQ40 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC52A3Q9NQ40 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SLC52A3Q9NQ40 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC52A3Q9NQ40 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC52A3Q9NQ40 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC52A3Q9NQ40 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
SLC52A3Q9NQ40 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
SLC52A3Q9NQ40 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.96■□□□□ 0.79
SLC52A3Q9NQ40 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SLC52A3Q9NQ40 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC52A3Q9NQ40 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms