Protein–RNA interactions for Protein: Q9H6I2

SOX17, Transcription factor SOX-17, humanhuman

Predicted RBP Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17Q9H6I2 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SOX17Q9H6I2 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
SOX17Q9H6I2 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SOX17Q9H6I2 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.4■□□□□ 0.86
SOX17Q9H6I2 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SOX17Q9H6I2 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.4■□□□□ 0.86
SOX17Q9H6I2 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SOX17Q9H6I2 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SOX17Q9H6I2 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SOX17Q9H6I2 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SOX17Q9H6I2 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
SOX17Q9H6I2 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.39■□□□□ 0.86
SOX17Q9H6I2 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.86
SOX17Q9H6I2 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SOX17Q9H6I2 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SOX17Q9H6I2 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SOX17Q9H6I2 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
SOX17Q9H6I2 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SOX17Q9H6I2 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SOX17Q9H6I2 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SOX17Q9H6I2 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SOX17Q9H6I2 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SOX17Q9H6I2 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SOX17Q9H6I2 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.39■□□□□ 0.85
SOX17Q9H6I2 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
SOX17Q9H6I2 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SOX17Q9H6I2 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.38■□□□□ 0.85
SOX17Q9H6I2 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SOX17Q9H6I2 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SOX17Q9H6I2 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
SOX17Q9H6I2 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SOX17Q9H6I2 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SOX17Q9H6I2 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SOX17Q9H6I2 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SOX17Q9H6I2 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SOX17Q9H6I2 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.37■□□□□ 0.85
SOX17Q9H6I2 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SOX17Q9H6I2 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
SOX17Q9H6I2 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.37■□□□□ 0.85
SOX17Q9H6I2 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SOX17Q9H6I2 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.37■□□□□ 0.85
SOX17Q9H6I2 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.37■□□□□ 0.85
SOX17Q9H6I2 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SOX17Q9H6I2 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SOX17Q9H6I2 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SOX17Q9H6I2 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SOX17Q9H6I2 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
SOX17Q9H6I2 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
SOX17Q9H6I2 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SOX17Q9H6I2 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SOX17Q9H6I2 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SOX17Q9H6I2 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
SOX17Q9H6I2 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
SOX17Q9H6I2 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.36■□□□□ 0.85
SOX17Q9H6I2 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SOX17Q9H6I2 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.36■□□□□ 0.85
SOX17Q9H6I2 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SOX17Q9H6I2 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SOX17Q9H6I2 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SOX17Q9H6I2 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.35■□□□□ 0.85
SOX17Q9H6I2 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SOX17Q9H6I2 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.35■□□□□ 0.85
SOX17Q9H6I2 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
SOX17Q9H6I2 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.35■□□□□ 0.85
SOX17Q9H6I2 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SOX17Q9H6I2 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.35■□□□□ 0.85
SOX17Q9H6I2 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.35■□□□□ 0.85
SOX17Q9H6I2 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.35■□□□□ 0.85
SOX17Q9H6I2 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SOX17Q9H6I2 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SOX17Q9H6I2 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
SOX17Q9H6I2 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SOX17Q9H6I2 AL157384.1-201ENST00000445995 2473 ntBASIC20.34■□□□□ 0.85
SOX17Q9H6I2 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SOX17Q9H6I2 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.34■□□□□ 0.85
SOX17Q9H6I2 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SOX17Q9H6I2 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.34■□□□□ 0.85
SOX17Q9H6I2 AC079089.2-201ENST00000531211 1277 ntBASIC20.34■□□□□ 0.85
SOX17Q9H6I2 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.34■□□□□ 0.85
SOX17Q9H6I2 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.34■□□□□ 0.85
SOX17Q9H6I2 AL137784.2-201ENST00000607332 1000 ntBASIC20.34■□□□□ 0.85
SOX17Q9H6I2 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
SOX17Q9H6I2 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.34■□□□□ 0.85
SOX17Q9H6I2 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.34■□□□□ 0.85
SOX17Q9H6I2 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SOX17Q9H6I2 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.34■□□□□ 0.85
SOX17Q9H6I2 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SOX17Q9H6I2 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SOX17Q9H6I2 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SOX17Q9H6I2 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SOX17Q9H6I2 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
SOX17Q9H6I2 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.34■□□□□ 0.85
SOX17Q9H6I2 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SOX17Q9H6I2 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SOX17Q9H6I2 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SOX17Q9H6I2 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SOX17Q9H6I2 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SOX17Q9H6I2 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
SOX17Q9H6I2 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
SOX17Q9H6I2 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms