Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
KRTAP3-1Q9BYR8 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC10.69□□□□□ -0.7
KRTAP3-1Q9BYR8 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP3-1Q9BYR8 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC10.69□□□□□ -0.7
KRTAP3-1Q9BYR8 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP3-1Q9BYR8 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP3-1Q9BYR8 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP3-1Q9BYR8 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC10.69□□□□□ -0.7
KRTAP3-1Q9BYR8 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP3-1Q9BYR8 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP3-1Q9BYR8 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP3-1Q9BYR8 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC10.69□□□□□ -0.7
KRTAP3-1Q9BYR8 AC017007.3-201ENST00000479865 435 ntBASIC10.69□□□□□ -0.7
KRTAP3-1Q9BYR8 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP3-1Q9BYR8 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC10.69□□□□□ -0.7
KRTAP3-1Q9BYR8 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
KRTAP3-1Q9BYR8 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC10.69□□□□□ -0.7
KRTAP3-1Q9BYR8 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC10.69□□□□□ -0.7
KRTAP3-1Q9BYR8 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC10.69□□□□□ -0.7
KRTAP3-1Q9BYR8 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP3-1Q9BYR8 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP3-1Q9BYR8 AC027702.1-201ENST00000563810 1770 ntBASIC10.69□□□□□ -0.7
KRTAP3-1Q9BYR8 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP3-1Q9BYR8 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP3-1Q9BYR8 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP3-1Q9BYR8 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
KRTAP3-1Q9BYR8 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
KRTAP3-1Q9BYR8 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP3-1Q9BYR8 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
KRTAP3-1Q9BYR8 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.7
KRTAP3-1Q9BYR8 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP3-1Q9BYR8 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP3-1Q9BYR8 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP3-1Q9BYR8 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP3-1Q9BYR8 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP3-1Q9BYR8 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP3-1Q9BYR8 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
KRTAP3-1Q9BYR8 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP3-1Q9BYR8 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC10.68□□□□□ -0.7
KRTAP3-1Q9BYR8 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC10.68□□□□□ -0.7
KRTAP3-1Q9BYR8 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC10.68□□□□□ -0.7
KRTAP3-1Q9BYR8 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP3-1Q9BYR8 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP3-1Q9BYR8 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC10.68□□□□□ -0.7
KRTAP3-1Q9BYR8 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
KRTAP3-1Q9BYR8 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP3-1Q9BYR8 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC10.68□□□□□ -0.7
KRTAP3-1Q9BYR8 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP3-1Q9BYR8 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP3-1Q9BYR8 CREM-229ENST00000474362 1030 ntTSL 2 BASIC10.68□□□□□ -0.7
KRTAP3-1Q9BYR8 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP3-1Q9BYR8 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP3-1Q9BYR8 AL034346.1-201ENST00000568244 1277 ntBASIC10.68□□□□□ -0.7
KRTAP3-1Q9BYR8 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC10.68□□□□□ -0.7
KRTAP3-1Q9BYR8 AC087239.1-201ENST00000622671 572 ntBASIC10.68□□□□□ -0.7
KRTAP3-1Q9BYR8 Z99916.3-201ENST00000623422 1080 ntBASIC10.68□□□□□ -0.7
KRTAP3-1Q9BYR8 RASSF1-AS1-201ENST00000629828 790 ntBASIC10.68□□□□□ -0.7
KRTAP3-1Q9BYR8 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC10.68□□□□□ -0.7
KRTAP3-1Q9BYR8 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
KRTAP3-1Q9BYR8 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP3-1Q9BYR8 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC10.68□□□□□ -0.7
KRTAP3-1Q9BYR8 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP3-1Q9BYR8 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP3-1Q9BYR8 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC10.68□□□□□ -0.7
KRTAP3-1Q9BYR8 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP3-1Q9BYR8 GATM-206ENST00000558336 1522 ntTSL 2 BASIC10.68□□□□□ -0.7
KRTAP3-1Q9BYR8 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP3-1Q9BYR8 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP3-1Q9BYR8 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP3-1Q9BYR8 NARF-205ENST00000412079 1760 ntTSL 5 BASIC10.67□□□□□ -0.7
KRTAP3-1Q9BYR8 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP3-1Q9BYR8 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP3-1Q9BYR8 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP3-1Q9BYR8 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
KRTAP3-1Q9BYR8 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP3-1Q9BYR8 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP3-1Q9BYR8 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP3-1Q9BYR8 AC009299.2-201ENST00000482477 511 ntBASIC10.67□□□□□ -0.7
KRTAP3-1Q9BYR8 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC10.67□□□□□ -0.7
KRTAP3-1Q9BYR8 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP3-1Q9BYR8 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP3-1Q9BYR8 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
KRTAP3-1Q9BYR8 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP3-1Q9BYR8 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC10.67□□□□□ -0.7
KRTAP3-1Q9BYR8 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP3-1Q9BYR8 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC10.67□□□□□ -0.7
KRTAP3-1Q9BYR8 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP3-1Q9BYR8 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC10.67□□□□□ -0.7
KRTAP3-1Q9BYR8 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC10.67□□□□□ -0.7
KRTAP3-1Q9BYR8 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP3-1Q9BYR8 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP3-1Q9BYR8 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC10.67□□□□□ -0.7
KRTAP3-1Q9BYR8 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
KRTAP3-1Q9BYR8 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
KRTAP3-1Q9BYR8 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
KRTAP3-1Q9BYR8 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC10.66□□□□□ -0.7
KRTAP3-1Q9BYR8 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
KRTAP3-1Q9BYR8 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC10.66□□□□□ -0.7
KRTAP3-1Q9BYR8 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
KRTAP3-1Q9BYR8 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms