Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.79■□□□□ 0.76
YIPF4Q9BSR8 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.79■□□□□ 0.76
YIPF4Q9BSR8 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
YIPF4Q9BSR8 AC009237.3-201ENST00000393279 1427 ntBASIC19.79■□□□□ 0.76
YIPF4Q9BSR8 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
YIPF4Q9BSR8 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
YIPF4Q9BSR8 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
YIPF4Q9BSR8 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.79■□□□□ 0.76
YIPF4Q9BSR8 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.79■□□□□ 0.76
YIPF4Q9BSR8 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.79■□□□□ 0.76
YIPF4Q9BSR8 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.79■□□□□ 0.76
YIPF4Q9BSR8 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.79■□□□□ 0.76
YIPF4Q9BSR8 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
YIPF4Q9BSR8 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
YIPF4Q9BSR8 AL024507.2-201ENST00000606070 2574 ntBASIC19.79■□□□□ 0.76
YIPF4Q9BSR8 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.78■□□□□ 0.76
YIPF4Q9BSR8 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
YIPF4Q9BSR8 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
YIPF4Q9BSR8 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
YIPF4Q9BSR8 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.78■□□□□ 0.76
YIPF4Q9BSR8 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
YIPF4Q9BSR8 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.78■□□□□ 0.76
YIPF4Q9BSR8 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
YIPF4Q9BSR8 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.78■□□□□ 0.76
YIPF4Q9BSR8 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.78■□□□□ 0.76
YIPF4Q9BSR8 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
YIPF4Q9BSR8 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
YIPF4Q9BSR8 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.78■□□□□ 0.76
YIPF4Q9BSR8 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.78■□□□□ 0.76
YIPF4Q9BSR8 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
YIPF4Q9BSR8 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.78■□□□□ 0.76
YIPF4Q9BSR8 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
YIPF4Q9BSR8 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
YIPF4Q9BSR8 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
YIPF4Q9BSR8 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
YIPF4Q9BSR8 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.77■□□□□ 0.76
YIPF4Q9BSR8 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.77■□□□□ 0.76
YIPF4Q9BSR8 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
YIPF4Q9BSR8 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
YIPF4Q9BSR8 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
YIPF4Q9BSR8 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
YIPF4Q9BSR8 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.77■□□□□ 0.76
YIPF4Q9BSR8 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
YIPF4Q9BSR8 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.77■□□□□ 0.76
YIPF4Q9BSR8 MIR6084-201ENST00000622012 110 ntBASIC19.77■□□□□ 0.76
YIPF4Q9BSR8 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
YIPF4Q9BSR8 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
YIPF4Q9BSR8 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
YIPF4Q9BSR8 AC005224.4-201ENST00000583262 1652 ntBASIC19.77■□□□□ 0.76
YIPF4Q9BSR8 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
YIPF4Q9BSR8 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
YIPF4Q9BSR8 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.76■□□□□ 0.75
YIPF4Q9BSR8 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
YIPF4Q9BSR8 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
YIPF4Q9BSR8 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
YIPF4Q9BSR8 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
YIPF4Q9BSR8 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
YIPF4Q9BSR8 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
YIPF4Q9BSR8 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
YIPF4Q9BSR8 AC055733.4-201ENST00000638462 1354 ntBASIC19.76■□□□□ 0.75
YIPF4Q9BSR8 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.76■□□□□ 0.75
YIPF4Q9BSR8 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.76■□□□□ 0.75
YIPF4Q9BSR8 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
YIPF4Q9BSR8 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.76■□□□□ 0.75
YIPF4Q9BSR8 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
YIPF4Q9BSR8 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
YIPF4Q9BSR8 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
YIPF4Q9BSR8 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
YIPF4Q9BSR8 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
YIPF4Q9BSR8 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
YIPF4Q9BSR8 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
YIPF4Q9BSR8 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.75■□□□□ 0.75
YIPF4Q9BSR8 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.75■□□□□ 0.75
YIPF4Q9BSR8 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
YIPF4Q9BSR8 AC012414.1-201ENST00000556676 535 ntBASIC19.75■□□□□ 0.75
YIPF4Q9BSR8 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.75■□□□□ 0.75
YIPF4Q9BSR8 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.75■□□□□ 0.75
YIPF4Q9BSR8 MIR6821-201ENST00000617625 74 ntBASIC19.75■□□□□ 0.75
YIPF4Q9BSR8 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
YIPF4Q9BSR8 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
YIPF4Q9BSR8 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
YIPF4Q9BSR8 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
YIPF4Q9BSR8 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
YIPF4Q9BSR8 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
YIPF4Q9BSR8 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
YIPF4Q9BSR8 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.75■□□□□ 0.75
YIPF4Q9BSR8 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
YIPF4Q9BSR8 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.75■□□□□ 0.75
YIPF4Q9BSR8 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
YIPF4Q9BSR8 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
YIPF4Q9BSR8 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
YIPF4Q9BSR8 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
YIPF4Q9BSR8 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
YIPF4Q9BSR8 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
YIPF4Q9BSR8 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
YIPF4Q9BSR8 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
YIPF4Q9BSR8 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
YIPF4Q9BSR8 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.74■□□□□ 0.75
YIPF4Q9BSR8 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.74■□□□□ 0.75
YIPF4Q9BSR8 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms