Protein–RNA interactions for Protein: Q96NZ1

FOXN4, Forkhead box protein N4, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4Q96NZ1 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXN4Q96NZ1 AC087623.3-201ENST00000607047 1098 ntBASIC18.86■□□□□ 0.61
FOXN4Q96NZ1 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXN4Q96NZ1 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
FOXN4Q96NZ1 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
FOXN4Q96NZ1 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.86■□□□□ 0.61
FOXN4Q96NZ1 AP006587.3-201ENST00000525742 1516 ntBASIC18.85■□□□□ 0.61
FOXN4Q96NZ1 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.85■□□□□ 0.61
FOXN4Q96NZ1 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.85■□□□□ 0.61
FOXN4Q96NZ1 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXN4Q96NZ1 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.85■□□□□ 0.61
FOXN4Q96NZ1 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXN4Q96NZ1 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.85■□□□□ 0.61
FOXN4Q96NZ1 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
FOXN4Q96NZ1 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.85■□□□□ 0.61
FOXN4Q96NZ1 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXN4Q96NZ1 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXN4Q96NZ1 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
FOXN4Q96NZ1 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
FOXN4Q96NZ1 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.85■□□□□ 0.61
FOXN4Q96NZ1 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXN4Q96NZ1 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.85■□□□□ 0.61
FOXN4Q96NZ1 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXN4Q96NZ1 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXN4Q96NZ1 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXN4Q96NZ1 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXN4Q96NZ1 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXN4Q96NZ1 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXN4Q96NZ1 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.84■□□□□ 0.61
FOXN4Q96NZ1 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXN4Q96NZ1 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
FOXN4Q96NZ1 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.84■□□□□ 0.61
FOXN4Q96NZ1 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.84■□□□□ 0.61
FOXN4Q96NZ1 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXN4Q96NZ1 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
FOXN4Q96NZ1 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.84■□□□□ 0.61
FOXN4Q96NZ1 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXN4Q96NZ1 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.84■□□□□ 0.61
FOXN4Q96NZ1 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
FOXN4Q96NZ1 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
FOXN4Q96NZ1 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.83■□□□□ 0.61
FOXN4Q96NZ1 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
FOXN4Q96NZ1 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
FOXN4Q96NZ1 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
FOXN4Q96NZ1 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
FOXN4Q96NZ1 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
FOXN4Q96NZ1 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.83■□□□□ 0.6
FOXN4Q96NZ1 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.83■□□□□ 0.6
FOXN4Q96NZ1 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.83■□□□□ 0.6
FOXN4Q96NZ1 AC105233.4-201ENST00000642045 216 ntBASIC18.83■□□□□ 0.6
FOXN4Q96NZ1 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
FOXN4Q96NZ1 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
FOXN4Q96NZ1 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.6
FOXN4Q96NZ1 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
FOXN4Q96NZ1 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
FOXN4Q96NZ1 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.82■□□□□ 0.6
FOXN4Q96NZ1 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXN4Q96NZ1 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXN4Q96NZ1 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.82■□□□□ 0.6
FOXN4Q96NZ1 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXN4Q96NZ1 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
FOXN4Q96NZ1 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.82■□□□□ 0.6
FOXN4Q96NZ1 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.82■□□□□ 0.6
FOXN4Q96NZ1 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.82■□□□□ 0.6
FOXN4Q96NZ1 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.82■□□□□ 0.6
FOXN4Q96NZ1 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.82■□□□□ 0.6
FOXN4Q96NZ1 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
FOXN4Q96NZ1 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXN4Q96NZ1 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXN4Q96NZ1 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXN4Q96NZ1 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.81■□□□□ 0.6
FOXN4Q96NZ1 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXN4Q96NZ1 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXN4Q96NZ1 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.81■□□□□ 0.6
FOXN4Q96NZ1 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.81■□□□□ 0.6
FOXN4Q96NZ1 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.81■□□□□ 0.6
FOXN4Q96NZ1 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
FOXN4Q96NZ1 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXN4Q96NZ1 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXN4Q96NZ1 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.81■□□□□ 0.6
FOXN4Q96NZ1 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.81■□□□□ 0.6
FOXN4Q96NZ1 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.81■□□□□ 0.6
FOXN4Q96NZ1 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXN4Q96NZ1 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXN4Q96NZ1 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
FOXN4Q96NZ1 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FOXN4Q96NZ1 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
FOXN4Q96NZ1 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.8■□□□□ 0.6
FOXN4Q96NZ1 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FOXN4Q96NZ1 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FOXN4Q96NZ1 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FOXN4Q96NZ1 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FOXN4Q96NZ1 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FOXN4Q96NZ1 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.8■□□□□ 0.6
FOXN4Q96NZ1 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FOXN4Q96NZ1 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
FOXN4Q96NZ1 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FOXN4Q96NZ1 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.8■□□□□ 0.6
FOXN4Q96NZ1 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.8■□□□□ 0.6
FOXN4Q96NZ1 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms