Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC138Q96M89 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CCDC138Q96M89 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC138Q96M89 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CCDC138Q96M89 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CCDC138Q96M89 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.76■□□□□ 0.91
CCDC138Q96M89 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC138Q96M89 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC138Q96M89 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC138Q96M89 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC138Q96M89 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC138Q96M89 AC005224.4-201ENST00000583262 1652 ntBASIC20.76■□□□□ 0.91
CCDC138Q96M89 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC138Q96M89 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC138Q96M89 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CCDC138Q96M89 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CCDC138Q96M89 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CCDC138Q96M89 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC138Q96M89 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC138Q96M89 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.75■□□□□ 0.91
CCDC138Q96M89 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.75■□□□□ 0.91
CCDC138Q96M89 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.75■□□□□ 0.91
CCDC138Q96M89 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC138Q96M89 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC138Q96M89 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.75■□□□□ 0.91
CCDC138Q96M89 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC138Q96M89 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC138Q96M89 AC244015.2-201ENST00000616358 1861 ntBASIC20.75■□□□□ 0.91
CCDC138Q96M89 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CCDC138Q96M89 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC138Q96M89 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CCDC138Q96M89 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC138Q96M89 AC003102.1-202ENST00000563394 1796 ntBASIC20.74■□□□□ 0.91
CCDC138Q96M89 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CCDC138Q96M89 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC138Q96M89 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC138Q96M89 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC138Q96M89 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC138Q96M89 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC138Q96M89 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.74■□□□□ 0.91
CCDC138Q96M89 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC138Q96M89 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC138Q96M89 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC138Q96M89 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC138Q96M89 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC138Q96M89 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.73■□□□□ 0.91
CCDC138Q96M89 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC138Q96M89 AC055733.4-201ENST00000638462 1354 ntBASIC20.73■□□□□ 0.91
CCDC138Q96M89 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC138Q96M89 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC138Q96M89 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC138Q96M89 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC138Q96M89 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.73■□□□□ 0.91
CCDC138Q96M89 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.73■□□□□ 0.91
CCDC138Q96M89 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.73■□□□□ 0.91
CCDC138Q96M89 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CCDC138Q96M89 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CCDC138Q96M89 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CCDC138Q96M89 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC138Q96M89 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC138Q96M89 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC138Q96M89 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC138Q96M89 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC138Q96M89 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.73■□□□□ 0.91
CCDC138Q96M89 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC138Q96M89 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC138Q96M89 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC138Q96M89 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC138Q96M89 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC138Q96M89 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC138Q96M89 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC138Q96M89 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC138Q96M89 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CCDC138Q96M89 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CCDC138Q96M89 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CCDC138Q96M89 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
CCDC138Q96M89 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC138Q96M89 MIR6084-201ENST00000622012 110 ntBASIC20.72■□□□□ 0.91
CCDC138Q96M89 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC138Q96M89 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC138Q96M89 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC138Q96M89 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC138Q96M89 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC138Q96M89 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC138Q96M89 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC138Q96M89 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
CCDC138Q96M89 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC138Q96M89 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.71■□□□□ 0.91
CCDC138Q96M89 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC138Q96M89 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC138Q96M89 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.71■□□□□ 0.91
CCDC138Q96M89 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC138Q96M89 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.71■□□□□ 0.91
CCDC138Q96M89 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC138Q96M89 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC138Q96M89 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC138Q96M89 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC138Q96M89 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC138Q96M89 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC138Q96M89 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms