Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.07■□□□□ 0.16
LINC00479Q96M42 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINC00479Q96M42 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.07■□□□□ 0.16
LINC00479Q96M42 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINC00479Q96M42 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINC00479Q96M42 BX664725.1-201ENST00000438252 379 ntBASIC16.07■□□□□ 0.16
LINC00479Q96M42 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC16.07■□□□□ 0.16
LINC00479Q96M42 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC16.07■□□□□ 0.16
LINC00479Q96M42 AC092028.1-203ENST00000608262 953 ntBASIC16.07■□□□□ 0.16
LINC00479Q96M42 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINC00479Q96M42 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINC00479Q96M42 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINC00479Q96M42 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC16.07■□□□□ 0.16
LINC00479Q96M42 ADM-207ENST00000530439 1839 ntTSL 2 BASIC16.07■□□□□ 0.16
LINC00479Q96M42 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
LINC00479Q96M42 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.07■□□□□ 0.16
LINC00479Q96M42 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC16.07■□□□□ 0.16
LINC00479Q96M42 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC16.07■□□□□ 0.16
LINC00479Q96M42 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
LINC00479Q96M42 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LINC00479Q96M42 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINC00479Q96M42 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINC00479Q96M42 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC00479Q96M42 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LINC00479Q96M42 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
LINC00479Q96M42 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC00479Q96M42 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC00479Q96M42 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LINC00479Q96M42 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC00479Q96M42 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC00479Q96M42 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LINC00479Q96M42 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC16.06■□□□□ 0.16
LINC00479Q96M42 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LINC00479Q96M42 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LINC00479Q96M42 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC00479Q96M42 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC16.06■□□□□ 0.16
LINC00479Q96M42 GTSE1-AS1-202ENST00000623117 1518 ntBASIC16.06■□□□□ 0.16
LINC00479Q96M42 CD72-202ENST00000378430 585 ntTSL 3 BASIC16.06■□□□□ 0.16
LINC00479Q96M42 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC16.06■□□□□ 0.16
LINC00479Q96M42 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
LINC00479Q96M42 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC16.06■□□□□ 0.16
LINC00479Q96M42 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC16.06■□□□□ 0.16
LINC00479Q96M42 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC00479Q96M42 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
LINC00479Q96M42 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
LINC00479Q96M42 AL033527.3-201ENST00000566366 1196 ntBASIC16.06■□□□□ 0.16
LINC00479Q96M42 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC16.06■□□□□ 0.16
LINC00479Q96M42 AL451085.2-201ENST00000605085 799 ntBASIC16.06■□□□□ 0.16
LINC00479Q96M42 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LINC00479Q96M42 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.06■□□□□ 0.16
LINC00479Q96M42 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC00479Q96M42 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC00479Q96M42 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
LINC00479Q96M42 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
LINC00479Q96M42 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC00479Q96M42 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC16.06■□□□□ 0.16
LINC00479Q96M42 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC16.05■□□□□ 0.16
LINC00479Q96M42 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00479Q96M42 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00479Q96M42 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00479Q96M42 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00479Q96M42 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00479Q96M42 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00479Q96M42 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00479Q96M42 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00479Q96M42 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00479Q96M42 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
LINC00479Q96M42 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00479Q96M42 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00479Q96M42 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00479Q96M42 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00479Q96M42 PLK5-205ENST00000642079 1969 ntBASIC16.05■□□□□ 0.16
LINC00479Q96M42 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
LINC00479Q96M42 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
LINC00479Q96M42 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00479Q96M42 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
LINC00479Q96M42 AC003102.1-202ENST00000563394 1796 ntBASIC16.05■□□□□ 0.16
LINC00479Q96M42 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00479Q96M42 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00479Q96M42 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
LINC00479Q96M42 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00479Q96M42 AC006128.1-201ENST00000624704 1661 ntBASIC16.05■□□□□ 0.16
LINC00479Q96M42 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00479Q96M42 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00479Q96M42 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00479Q96M42 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINC00479Q96M42 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LINC00479Q96M42 AC133637.1-201ENST00000624115 1537 ntBASIC16.04■□□□□ 0.16
LINC00479Q96M42 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.04■□□□□ 0.16
LINC00479Q96M42 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINC00479Q96M42 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC16.04■□□□□ 0.16
LINC00479Q96M42 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINC00479Q96M42 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINC00479Q96M42 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINC00479Q96M42 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINC00479Q96M42 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINC00479Q96M42 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINC00479Q96M42 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LINC00479Q96M42 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC16.04■□□□□ 0.16
LINC00479Q96M42 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms