Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.28■□□□□ 0.84
UBE2E3Q969T4 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBE2E3Q969T4 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBE2E3Q969T4 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBE2E3Q969T4 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
UBE2E3Q969T4 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBE2E3Q969T4 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBE2E3Q969T4 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
UBE2E3Q969T4 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
UBE2E3Q969T4 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBE2E3Q969T4 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBE2E3Q969T4 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
UBE2E3Q969T4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.27■□□□□ 0.84
UBE2E3Q969T4 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
UBE2E3Q969T4 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBE2E3Q969T4 AC123595.1-201ENST00000440769 1046 ntBASIC20.27■□□□□ 0.84
UBE2E3Q969T4 AC053503.5-201ENST00000601508 636 ntBASIC20.27■□□□□ 0.84
UBE2E3Q969T4 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBE2E3Q969T4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
UBE2E3Q969T4 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
UBE2E3Q969T4 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.27■□□□□ 0.83
UBE2E3Q969T4 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
UBE2E3Q969T4 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBE2E3Q969T4 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.26■□□□□ 0.83
UBE2E3Q969T4 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.26■□□□□ 0.83
UBE2E3Q969T4 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBE2E3Q969T4 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
UBE2E3Q969T4 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.26■□□□□ 0.83
UBE2E3Q969T4 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
UBE2E3Q969T4 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.26■□□□□ 0.83
UBE2E3Q969T4 AC079140.4-201ENST00000507448 529 ntBASIC20.26■□□□□ 0.83
UBE2E3Q969T4 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
UBE2E3Q969T4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBE2E3Q969T4 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBE2E3Q969T4 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
UBE2E3Q969T4 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBE2E3Q969T4 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBE2E3Q969T4 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBE2E3Q969T4 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
UBE2E3Q969T4 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UBE2E3Q969T4 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.25■□□□□ 0.83
UBE2E3Q969T4 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.25■□□□□ 0.83
UBE2E3Q969T4 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.25■□□□□ 0.83
UBE2E3Q969T4 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UBE2E3Q969T4 EEF1DP3-203ENST00000566025 782 ntBASIC20.25■□□□□ 0.83
UBE2E3Q969T4 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.25■□□□□ 0.83
UBE2E3Q969T4 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.25■□□□□ 0.83
UBE2E3Q969T4 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
UBE2E3Q969T4 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBE2E3Q969T4 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.25■□□□□ 0.83
UBE2E3Q969T4 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.25■□□□□ 0.83
UBE2E3Q969T4 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UBE2E3Q969T4 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.25■□□□□ 0.83
UBE2E3Q969T4 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UBE2E3Q969T4 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.24■□□□□ 0.83
UBE2E3Q969T4 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UBE2E3Q969T4 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
UBE2E3Q969T4 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBE2E3Q969T4 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.24■□□□□ 0.83
UBE2E3Q969T4 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.24■□□□□ 0.83
UBE2E3Q969T4 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
UBE2E3Q969T4 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBE2E3Q969T4 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UBE2E3Q969T4 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.24■□□□□ 0.83
UBE2E3Q969T4 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBE2E3Q969T4 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBE2E3Q969T4 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
UBE2E3Q969T4 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBE2E3Q969T4 KRT87P-202ENST00000534226 1464 ntBASIC20.24■□□□□ 0.83
UBE2E3Q969T4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBE2E3Q969T4 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBE2E3Q969T4 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
UBE2E3Q969T4 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBE2E3Q969T4 FEM1AP4-201ENST00000443167 1987 ntBASIC20.23■□□□□ 0.83
UBE2E3Q969T4 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.23■□□□□ 0.83
UBE2E3Q969T4 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBE2E3Q969T4 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
UBE2E3Q969T4 YBX1P1-201ENST00000445822 960 ntBASIC20.23■□□□□ 0.83
UBE2E3Q969T4 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.23■□□□□ 0.83
UBE2E3Q969T4 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBE2E3Q969T4 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBE2E3Q969T4 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.23■□□□□ 0.83
UBE2E3Q969T4 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.23■□□□□ 0.83
UBE2E3Q969T4 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBE2E3Q969T4 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
UBE2E3Q969T4 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBE2E3Q969T4 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.22■□□□□ 0.83
UBE2E3Q969T4 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBE2E3Q969T4 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBE2E3Q969T4 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.22■□□□□ 0.83
UBE2E3Q969T4 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBE2E3Q969T4 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
UBE2E3Q969T4 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.22■□□□□ 0.83
UBE2E3Q969T4 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
UBE2E3Q969T4 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.21■□□□□ 0.83
UBE2E3Q969T4 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.21■□□□□ 0.83
UBE2E3Q969T4 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBE2E3Q969T4 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBE2E3Q969T4 ZNRF2P3-201ENST00000424200 374 ntBASIC20.21■□□□□ 0.83
UBE2E3Q969T4 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms