Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTP4A1Q93096 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTP4A1Q93096 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTP4A1Q93096 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTP4A1Q93096 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTP4A1Q93096 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PTP4A1Q93096 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
PTP4A1Q93096 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTP4A1Q93096 AP006587.3-201ENST00000525742 1516 ntBASIC18.91■□□□□ 0.62
PTP4A1Q93096 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.91■□□□□ 0.62
PTP4A1Q93096 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.91■□□□□ 0.62
PTP4A1Q93096 PBX2P1-201ENST00000493219 1291 ntBASIC18.91■□□□□ 0.62
PTP4A1Q93096 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.91■□□□□ 0.62
PTP4A1Q93096 AC024257.2-201ENST00000549699 147 ntBASIC18.91■□□□□ 0.62
PTP4A1Q93096 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PTP4A1Q93096 AC135279.3-201ENST00000610945 1311 ntBASIC18.91■□□□□ 0.62
PTP4A1Q93096 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PTP4A1Q93096 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PTP4A1Q93096 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
PTP4A1Q93096 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.9■□□□□ 0.62
PTP4A1Q93096 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.9■□□□□ 0.62
PTP4A1Q93096 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.9■□□□□ 0.62
PTP4A1Q93096 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.9■□□□□ 0.62
PTP4A1Q93096 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTP4A1Q93096 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTP4A1Q93096 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTP4A1Q93096 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PTP4A1Q93096 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.9■□□□□ 0.62
PTP4A1Q93096 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PTP4A1Q93096 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PTP4A1Q93096 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
PTP4A1Q93096 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTP4A1Q93096 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTP4A1Q93096 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PTP4A1Q93096 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTP4A1Q93096 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PTP4A1Q93096 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTP4A1Q93096 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.9■□□□□ 0.62
PTP4A1Q93096 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTP4A1Q93096 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.9■□□□□ 0.62
PTP4A1Q93096 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTP4A1Q93096 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
PTP4A1Q93096 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PTP4A1Q93096 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
PTP4A1Q93096 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTP4A1Q93096 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.89■□□□□ 0.61
PTP4A1Q93096 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTP4A1Q93096 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
PTP4A1Q93096 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
PTP4A1Q93096 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTP4A1Q93096 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
PTP4A1Q93096 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTP4A1Q93096 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PTP4A1Q93096 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTP4A1Q93096 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
PTP4A1Q93096 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.89■□□□□ 0.61
PTP4A1Q93096 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.89■□□□□ 0.61
PTP4A1Q93096 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.89■□□□□ 0.61
PTP4A1Q93096 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.89■□□□□ 0.61
PTP4A1Q93096 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTP4A1Q93096 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.89■□□□□ 0.61
PTP4A1Q93096 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PTP4A1Q93096 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.88■□□□□ 0.61
PTP4A1Q93096 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.88■□□□□ 0.61
PTP4A1Q93096 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.88■□□□□ 0.61
PTP4A1Q93096 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PTP4A1Q93096 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.88■□□□□ 0.61
PTP4A1Q93096 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
PTP4A1Q93096 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTP4A1Q93096 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.88■□□□□ 0.61
PTP4A1Q93096 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTP4A1Q93096 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.88■□□□□ 0.61
PTP4A1Q93096 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
PTP4A1Q93096 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.88■□□□□ 0.61
PTP4A1Q93096 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.88■□□□□ 0.61
PTP4A1Q93096 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.88■□□□□ 0.61
PTP4A1Q93096 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.88■□□□□ 0.61
PTP4A1Q93096 AC106739.1-201ENST00000617035 715 ntBASIC18.88■□□□□ 0.61
PTP4A1Q93096 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.88■□□□□ 0.61
PTP4A1Q93096 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PTP4A1Q93096 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PTP4A1Q93096 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PTP4A1Q93096 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTP4A1Q93096 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTP4A1Q93096 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTP4A1Q93096 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
PTP4A1Q93096 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTP4A1Q93096 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTP4A1Q93096 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.87■□□□□ 0.61
PTP4A1Q93096 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.87■□□□□ 0.61
PTP4A1Q93096 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PTP4A1Q93096 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.87■□□□□ 0.61
PTP4A1Q93096 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.87■□□□□ 0.61
PTP4A1Q93096 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.87■□□□□ 0.61
PTP4A1Q93096 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
PTP4A1Q93096 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.87■□□□□ 0.61
PTP4A1Q93096 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.87■□□□□ 0.61
PTP4A1Q93096 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.87■□□□□ 0.61
PTP4A1Q93096 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTP4A1Q93096 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms