Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HPS1Q92902 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HPS1Q92902 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.1■□□□□ 0.65
HPS1Q92902 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.1■□□□□ 0.65
HPS1Q92902 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.1■□□□□ 0.65
HPS1Q92902 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.1■□□□□ 0.65
HPS1Q92902 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.1■□□□□ 0.65
HPS1Q92902 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.1■□□□□ 0.65
HPS1Q92902 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HPS1Q92902 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HPS1Q92902 AC026471.1-201ENST00000564629 3026 ntBASIC19.1■□□□□ 0.65
HPS1Q92902 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
HPS1Q92902 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HPS1Q92902 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.1■□□□□ 0.65
HPS1Q92902 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.1■□□□□ 0.65
HPS1Q92902 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HPS1Q92902 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
HPS1Q92902 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.09■□□□□ 0.65
HPS1Q92902 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.09■□□□□ 0.65
HPS1Q92902 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.09■□□□□ 0.65
HPS1Q92902 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HPS1Q92902 SUDS3P1-201ENST00000505831 966 ntBASIC19.09■□□□□ 0.65
HPS1Q92902 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
HPS1Q92902 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.09■□□□□ 0.65
HPS1Q92902 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
HPS1Q92902 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HPS1Q92902 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HPS1Q92902 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HPS1Q92902 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HPS1Q92902 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HPS1Q92902 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HPS1Q92902 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.08■□□□□ 0.65
HPS1Q92902 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HPS1Q92902 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
HPS1Q92902 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.08■□□□□ 0.64
HPS1Q92902 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
HPS1Q92902 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HPS1Q92902 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.08■□□□□ 0.64
HPS1Q92902 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HPS1Q92902 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.08■□□□□ 0.64
HPS1Q92902 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
HPS1Q92902 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.08■□□□□ 0.64
HPS1Q92902 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.08■□□□□ 0.64
HPS1Q92902 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HPS1Q92902 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HPS1Q92902 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HPS1Q92902 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HPS1Q92902 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HPS1Q92902 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.07■□□□□ 0.64
HPS1Q92902 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.07■□□□□ 0.64
HPS1Q92902 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
HPS1Q92902 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HPS1Q92902 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HPS1Q92902 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.07■□□□□ 0.64
HPS1Q92902 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.07■□□□□ 0.64
HPS1Q92902 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.07■□□□□ 0.64
HPS1Q92902 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.07■□□□□ 0.64
HPS1Q92902 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HPS1Q92902 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.07■□□□□ 0.64
HPS1Q92902 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.07■□□□□ 0.64
HPS1Q92902 AC024257.2-201ENST00000549699 147 ntBASIC19.07■□□□□ 0.64
HPS1Q92902 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HPS1Q92902 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
HPS1Q92902 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HPS1Q92902 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HPS1Q92902 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HPS1Q92902 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
HPS1Q92902 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
HPS1Q92902 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HPS1Q92902 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HPS1Q92902 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HPS1Q92902 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.06■□□□□ 0.64
HPS1Q92902 AL031432.3-201ENST00000607698 485 ntBASIC19.06■□□□□ 0.64
HPS1Q92902 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
HPS1Q92902 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.06■□□□□ 0.64
HPS1Q92902 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
HPS1Q92902 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HPS1Q92902 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HPS1Q92902 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
HPS1Q92902 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HPS1Q92902 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.06■□□□□ 0.64
HPS1Q92902 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HPS1Q92902 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
HPS1Q92902 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.05■□□□□ 0.64
HPS1Q92902 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HPS1Q92902 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HPS1Q92902 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HPS1Q92902 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HPS1Q92902 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HPS1Q92902 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.05■□□□□ 0.64
HPS1Q92902 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HPS1Q92902 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HPS1Q92902 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
HPS1Q92902 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
HPS1Q92902 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HPS1Q92902 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.05■□□□□ 0.64
HPS1Q92902 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HPS1Q92902 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
HPS1Q92902 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HPS1Q92902 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms