Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 MIR935-201ENST00000401179 91 ntBASIC18.46■□□□□ 0.55
RAB40AQ8WXH6 AC091305.1-201ENST00000479476 895 ntBASIC18.46■□□□□ 0.55
RAB40AQ8WXH6 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.46■□□□□ 0.55
RAB40AQ8WXH6 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RAB40AQ8WXH6 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAB40AQ8WXH6 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
RAB40AQ8WXH6 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.54
RAB40AQ8WXH6 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RAB40AQ8WXH6 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RAB40AQ8WXH6 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RAB40AQ8WXH6 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RAB40AQ8WXH6 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.45■□□□□ 0.54
RAB40AQ8WXH6 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RAB40AQ8WXH6 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.45■□□□□ 0.54
RAB40AQ8WXH6 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
RAB40AQ8WXH6 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RAB40AQ8WXH6 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RAB40AQ8WXH6 FEM1AP1-201ENST00000431297 1995 ntBASIC18.45■□□□□ 0.54
RAB40AQ8WXH6 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RAB40AQ8WXH6 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
RAB40AQ8WXH6 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.45■□□□□ 0.54
RAB40AQ8WXH6 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RAB40AQ8WXH6 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
RAB40AQ8WXH6 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.45■□□□□ 0.54
RAB40AQ8WXH6 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RAB40AQ8WXH6 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.45■□□□□ 0.54
RAB40AQ8WXH6 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RAB40AQ8WXH6 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RAB40AQ8WXH6 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.45■□□□□ 0.54
RAB40AQ8WXH6 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RAB40AQ8WXH6 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.44■□□□□ 0.54
RAB40AQ8WXH6 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
RAB40AQ8WXH6 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RAB40AQ8WXH6 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RAB40AQ8WXH6 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.44■□□□□ 0.54
RAB40AQ8WXH6 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
RAB40AQ8WXH6 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RAB40AQ8WXH6 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
RAB40AQ8WXH6 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
RAB40AQ8WXH6 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
RAB40AQ8WXH6 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RAB40AQ8WXH6 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RAB40AQ8WXH6 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RAB40AQ8WXH6 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RAB40AQ8WXH6 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.44■□□□□ 0.54
RAB40AQ8WXH6 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.44■□□□□ 0.54
RAB40AQ8WXH6 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
RAB40AQ8WXH6 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.44■□□□□ 0.54
RAB40AQ8WXH6 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.44■□□□□ 0.54
RAB40AQ8WXH6 AC027682.1-201ENST00000562846 899 ntBASIC18.44■□□□□ 0.54
RAB40AQ8WXH6 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
RAB40AQ8WXH6 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RAB40AQ8WXH6 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
RAB40AQ8WXH6 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
RAB40AQ8WXH6 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RAB40AQ8WXH6 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
RAB40AQ8WXH6 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RAB40AQ8WXH6 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RAB40AQ8WXH6 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RAB40AQ8WXH6 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RAB40AQ8WXH6 RASA4CP-201ENST00000424092 1398 ntBASIC18.43■□□□□ 0.54
RAB40AQ8WXH6 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RAB40AQ8WXH6 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RAB40AQ8WXH6 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
RAB40AQ8WXH6 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.43■□□□□ 0.54
RAB40AQ8WXH6 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.43■□□□□ 0.54
RAB40AQ8WXH6 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RAB40AQ8WXH6 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RAB40AQ8WXH6 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RAB40AQ8WXH6 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.43■□□□□ 0.54
RAB40AQ8WXH6 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.43■□□□□ 0.54
RAB40AQ8WXH6 AC008764.7-201ENST00000593779 1081 ntBASIC18.43■□□□□ 0.54
RAB40AQ8WXH6 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RAB40AQ8WXH6 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.43■□□□□ 0.54
RAB40AQ8WXH6 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RAB40AQ8WXH6 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RAB40AQ8WXH6 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RAB40AQ8WXH6 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RAB40AQ8WXH6 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.43■□□□□ 0.54
RAB40AQ8WXH6 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RAB40AQ8WXH6 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
RAB40AQ8WXH6 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RAB40AQ8WXH6 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
RAB40AQ8WXH6 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.42■□□□□ 0.54
RAB40AQ8WXH6 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RAB40AQ8WXH6 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
RAB40AQ8WXH6 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
RAB40AQ8WXH6 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RAB40AQ8WXH6 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RAB40AQ8WXH6 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RAB40AQ8WXH6 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
RAB40AQ8WXH6 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
RAB40AQ8WXH6 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RAB40AQ8WXH6 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.42■□□□□ 0.54
RAB40AQ8WXH6 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.42■□□□□ 0.54
RAB40AQ8WXH6 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
RAB40AQ8WXH6 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB40AQ8WXH6 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB40AQ8WXH6 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
RAB40AQ8WXH6 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms