Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRUB1Q8WWH5 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRUB1Q8WWH5 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.28■□□□□ 0.68
TRUB1Q8WWH5 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
TRUB1Q8WWH5 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.27■□□□□ 0.68
TRUB1Q8WWH5 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRUB1Q8WWH5 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRUB1Q8WWH5 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
TRUB1Q8WWH5 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
TRUB1Q8WWH5 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.27■□□□□ 0.68
TRUB1Q8WWH5 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRUB1Q8WWH5 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
TRUB1Q8WWH5 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRUB1Q8WWH5 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
TRUB1Q8WWH5 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRUB1Q8WWH5 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
TRUB1Q8WWH5 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.27■□□□□ 0.68
TRUB1Q8WWH5 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRUB1Q8WWH5 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.27■□□□□ 0.68
TRUB1Q8WWH5 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
TRUB1Q8WWH5 AC241377.3-202ENST00000626088 1088 ntBASIC19.27■□□□□ 0.68
TRUB1Q8WWH5 AC241585.3-202ENST00000628937 1088 ntBASIC19.27■□□□□ 0.68
TRUB1Q8WWH5 AC245100.8-202ENST00000629247 1058 ntBASIC19.27■□□□□ 0.68
TRUB1Q8WWH5 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
TRUB1Q8WWH5 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRUB1Q8WWH5 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRUB1Q8WWH5 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
TRUB1Q8WWH5 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
TRUB1Q8WWH5 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
TRUB1Q8WWH5 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRUB1Q8WWH5 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TRUB1Q8WWH5 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
TRUB1Q8WWH5 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRUB1Q8WWH5 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.26■□□□□ 0.67
TRUB1Q8WWH5 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
TRUB1Q8WWH5 AC012354.3-201ENST00000623734 483 ntBASIC19.26■□□□□ 0.67
TRUB1Q8WWH5 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.26■□□□□ 0.67
TRUB1Q8WWH5 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.26■□□□□ 0.67
TRUB1Q8WWH5 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRUB1Q8WWH5 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.26■□□□□ 0.67
TRUB1Q8WWH5 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.26■□□□□ 0.67
TRUB1Q8WWH5 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.26■□□□□ 0.67
TRUB1Q8WWH5 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.26■□□□□ 0.67
TRUB1Q8WWH5 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRUB1Q8WWH5 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.25■□□□□ 0.67
TRUB1Q8WWH5 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRUB1Q8WWH5 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRUB1Q8WWH5 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRUB1Q8WWH5 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRUB1Q8WWH5 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
TRUB1Q8WWH5 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRUB1Q8WWH5 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRUB1Q8WWH5 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRUB1Q8WWH5 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
TRUB1Q8WWH5 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRUB1Q8WWH5 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.25■□□□□ 0.67
TRUB1Q8WWH5 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRUB1Q8WWH5 MTDHP2-201ENST00000601468 714 ntBASIC19.25■□□□□ 0.67
TRUB1Q8WWH5 AFG3L1P-217ENST00000557444 2447 ntBASIC19.25■□□□□ 0.67
TRUB1Q8WWH5 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRUB1Q8WWH5 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRUB1Q8WWH5 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRUB1Q8WWH5 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.25■□□□□ 0.67
TRUB1Q8WWH5 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TRUB1Q8WWH5 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.25■□□□□ 0.67
TRUB1Q8WWH5 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRUB1Q8WWH5 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRUB1Q8WWH5 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.25■□□□□ 0.67
TRUB1Q8WWH5 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.25■□□□□ 0.67
TRUB1Q8WWH5 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRUB1Q8WWH5 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRUB1Q8WWH5 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TRUB1Q8WWH5 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRUB1Q8WWH5 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRUB1Q8WWH5 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRUB1Q8WWH5 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
TRUB1Q8WWH5 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRUB1Q8WWH5 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.24■□□□□ 0.67
TRUB1Q8WWH5 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.24■□□□□ 0.67
TRUB1Q8WWH5 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.24■□□□□ 0.67
TRUB1Q8WWH5 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRUB1Q8WWH5 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.24■□□□□ 0.67
TRUB1Q8WWH5 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRUB1Q8WWH5 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRUB1Q8WWH5 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRUB1Q8WWH5 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.24■□□□□ 0.67
TRUB1Q8WWH5 AC133637.1-201ENST00000624115 1537 ntBASIC19.24■□□□□ 0.67
TRUB1Q8WWH5 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
TRUB1Q8WWH5 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.24■□□□□ 0.67
TRUB1Q8WWH5 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRUB1Q8WWH5 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRUB1Q8WWH5 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRUB1Q8WWH5 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.23■□□□□ 0.67
TRUB1Q8WWH5 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.23■□□□□ 0.67
TRUB1Q8WWH5 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.23■□□□□ 0.67
TRUB1Q8WWH5 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRUB1Q8WWH5 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRUB1Q8WWH5 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRUB1Q8WWH5 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.23■□□□□ 0.67
TRUB1Q8WWH5 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms