Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF138Q8WVD3 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF138Q8WVD3 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
RNF138Q8WVD3 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF138Q8WVD3 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF138Q8WVD3 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.2■□□□□ 0.66
RNF138Q8WVD3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.2■□□□□ 0.66
RNF138Q8WVD3 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RNF138Q8WVD3 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF138Q8WVD3 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.2■□□□□ 0.66
RNF138Q8WVD3 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF138Q8WVD3 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RNF138Q8WVD3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF138Q8WVD3 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF138Q8WVD3 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.2■□□□□ 0.66
RNF138Q8WVD3 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF138Q8WVD3 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF138Q8WVD3 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF138Q8WVD3 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF138Q8WVD3 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF138Q8WVD3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.19■□□□□ 0.66
RNF138Q8WVD3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF138Q8WVD3 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RNF138Q8WVD3 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF138Q8WVD3 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.19■□□□□ 0.66
RNF138Q8WVD3 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.19■□□□□ 0.66
RNF138Q8WVD3 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.19■□□□□ 0.66
RNF138Q8WVD3 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
RNF138Q8WVD3 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
RNF138Q8WVD3 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.19■□□□□ 0.66
RNF138Q8WVD3 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.19■□□□□ 0.66
RNF138Q8WVD3 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.19■□□□□ 0.66
RNF138Q8WVD3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
RNF138Q8WVD3 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF138Q8WVD3 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF138Q8WVD3 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.19■□□□□ 0.66
RNF138Q8WVD3 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.19■□□□□ 0.66
RNF138Q8WVD3 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF138Q8WVD3 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.18■□□□□ 0.66
RNF138Q8WVD3 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF138Q8WVD3 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF138Q8WVD3 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RNF138Q8WVD3 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.18■□□□□ 0.66
RNF138Q8WVD3 MFSD11-216ENST00000590393 1141 ntBASIC19.18■□□□□ 0.66
RNF138Q8WVD3 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF138Q8WVD3 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.18■□□□□ 0.66
RNF138Q8WVD3 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.18■□□□□ 0.66
RNF138Q8WVD3 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF138Q8WVD3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.18■□□□□ 0.66
RNF138Q8WVD3 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RNF138Q8WVD3 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF138Q8WVD3 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF138Q8WVD3 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF138Q8WVD3 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF138Q8WVD3 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.18■□□□□ 0.66
RNF138Q8WVD3 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF138Q8WVD3 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RNF138Q8WVD3 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF138Q8WVD3 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
RNF138Q8WVD3 Z98882.1-201ENST00000622160 2253 ntBASIC19.17■□□□□ 0.66
RNF138Q8WVD3 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
RNF138Q8WVD3 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.17■□□□□ 0.66
RNF138Q8WVD3 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
RNF138Q8WVD3 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF138Q8WVD3 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.17■□□□□ 0.66
RNF138Q8WVD3 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF138Q8WVD3 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.17■□□□□ 0.66
RNF138Q8WVD3 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.16■□□□□ 0.66
RNF138Q8WVD3 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF138Q8WVD3 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF138Q8WVD3 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RNF138Q8WVD3 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.16■□□□□ 0.66
RNF138Q8WVD3 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF138Q8WVD3 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF138Q8WVD3 AC243732.1-201ENST00000612648 864 ntBASIC19.16■□□□□ 0.66
RNF138Q8WVD3 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.16■□□□□ 0.66
RNF138Q8WVD3 AC120498.10-201ENST00000621827 505 ntBASIC19.16■□□□□ 0.66
RNF138Q8WVD3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF138Q8WVD3 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF138Q8WVD3 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.16■□□□□ 0.66
RNF138Q8WVD3 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.16■□□□□ 0.66
RNF138Q8WVD3 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF138Q8WVD3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF138Q8WVD3 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF138Q8WVD3 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.15■□□□□ 0.66
RNF138Q8WVD3 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.15■□□□□ 0.66
RNF138Q8WVD3 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF138Q8WVD3 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF138Q8WVD3 AC016769.1-201ENST00000409132 1010 ntBASIC19.15■□□□□ 0.66
RNF138Q8WVD3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.15■□□□□ 0.66
RNF138Q8WVD3 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF138Q8WVD3 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF138Q8WVD3 AL137784.2-201ENST00000607332 1000 ntBASIC19.15■□□□□ 0.66
RNF138Q8WVD3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF138Q8WVD3 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.15■□□□□ 0.66
RNF138Q8WVD3 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF138Q8WVD3 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.15■□□□□ 0.66
RNF138Q8WVD3 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.15■□□□□ 0.66
RNF138Q8WVD3 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF138Q8WVD3 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms