Protein–RNA interactions for Protein: Q8TDM0

BCAS4, Breast carcinoma-amplified sequence 4, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS4Q8TDM0 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
BCAS4Q8TDM0 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
BCAS4Q8TDM0 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
BCAS4Q8TDM0 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.98
BCAS4Q8TDM0 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
BCAS4Q8TDM0 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
BCAS4Q8TDM0 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
BCAS4Q8TDM0 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
BCAS4Q8TDM0 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
BCAS4Q8TDM0 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BCAS4Q8TDM0 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BCAS4Q8TDM0 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
BCAS4Q8TDM0 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.19■□□□□ 0.98
BCAS4Q8TDM0 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
BCAS4Q8TDM0 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
BCAS4Q8TDM0 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
BCAS4Q8TDM0 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
BCAS4Q8TDM0 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BCAS4Q8TDM0 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.19■□□□□ 0.98
BCAS4Q8TDM0 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.19■□□□□ 0.98
BCAS4Q8TDM0 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
BCAS4Q8TDM0 AC018755.3-202ENST00000596210 929 ntBASIC21.19■□□□□ 0.98
BCAS4Q8TDM0 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BCAS4Q8TDM0 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
BCAS4Q8TDM0 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
BCAS4Q8TDM0 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
BCAS4Q8TDM0 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BCAS4Q8TDM0 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BCAS4Q8TDM0 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
BCAS4Q8TDM0 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BCAS4Q8TDM0 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BCAS4Q8TDM0 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
BCAS4Q8TDM0 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.18■□□□□ 0.98
BCAS4Q8TDM0 AC027702.1-201ENST00000563810 1770 ntBASIC21.18■□□□□ 0.98
BCAS4Q8TDM0 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BCAS4Q8TDM0 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BCAS4Q8TDM0 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.18■□□□□ 0.98
BCAS4Q8TDM0 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
BCAS4Q8TDM0 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
BCAS4Q8TDM0 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BCAS4Q8TDM0 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.18■□□□□ 0.98
BCAS4Q8TDM0 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
BCAS4Q8TDM0 AC022413.1-201ENST00000624602 984 ntBASIC21.18■□□□□ 0.98
BCAS4Q8TDM0 AC026471.1-201ENST00000564629 3026 ntBASIC21.18■□□□□ 0.98
BCAS4Q8TDM0 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BCAS4Q8TDM0 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.18■□□□□ 0.98
BCAS4Q8TDM0 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BCAS4Q8TDM0 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
BCAS4Q8TDM0 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.18■□□□□ 0.98
BCAS4Q8TDM0 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
BCAS4Q8TDM0 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
BCAS4Q8TDM0 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BCAS4Q8TDM0 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
BCAS4Q8TDM0 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.17■□□□□ 0.98
BCAS4Q8TDM0 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
BCAS4Q8TDM0 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
BCAS4Q8TDM0 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
BCAS4Q8TDM0 AC116562.4-201ENST00000641316 2276 ntBASIC21.16■□□□□ 0.98
BCAS4Q8TDM0 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.16■□□□□ 0.98
BCAS4Q8TDM0 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
BCAS4Q8TDM0 AC004687.1-201ENST00000579003 1625 ntBASIC21.16■□□□□ 0.98
BCAS4Q8TDM0 AC009831.1-201ENST00000580420 1582 ntBASIC21.16■□□□□ 0.98
BCAS4Q8TDM0 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
BCAS4Q8TDM0 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
BCAS4Q8TDM0 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
BCAS4Q8TDM0 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
BCAS4Q8TDM0 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
BCAS4Q8TDM0 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
BCAS4Q8TDM0 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
BCAS4Q8TDM0 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC21.16■□□□□ 0.98
BCAS4Q8TDM0 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.16■□□□□ 0.98
BCAS4Q8TDM0 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
BCAS4Q8TDM0 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
BCAS4Q8TDM0 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC21.15■□□□□ 0.98
BCAS4Q8TDM0 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.15■□□□□ 0.98
BCAS4Q8TDM0 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC21.15■□□□□ 0.98
BCAS4Q8TDM0 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
BCAS4Q8TDM0 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
BCAS4Q8TDM0 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
BCAS4Q8TDM0 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
BCAS4Q8TDM0 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
BCAS4Q8TDM0 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.15■□□□□ 0.98
BCAS4Q8TDM0 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
BCAS4Q8TDM0 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC21.15■□□□□ 0.98
BCAS4Q8TDM0 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.15■□□□□ 0.98
BCAS4Q8TDM0 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.15■□□□□ 0.98
BCAS4Q8TDM0 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
BCAS4Q8TDM0 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
BCAS4Q8TDM0 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
BCAS4Q8TDM0 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
BCAS4Q8TDM0 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.15■□□□□ 0.98
BCAS4Q8TDM0 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
BCAS4Q8TDM0 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.15■□□□□ 0.98
BCAS4Q8TDM0 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
BCAS4Q8TDM0 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC21.15■□□□□ 0.98
BCAS4Q8TDM0 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
BCAS4Q8TDM0 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
BCAS4Q8TDM0 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.98
BCAS4Q8TDM0 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
BCAS4Q8TDM0 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms