Protein–RNA interactions for Protein: Q8TCZ7

LINC00308, Putative uncharacterized protein encoded by LINC00308, humanhuman

Predictions only

Length 52 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00308Q8TCZ7 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
LINC00308Q8TCZ7 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00308Q8TCZ7 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00308Q8TCZ7 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00308Q8TCZ7 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00308Q8TCZ7 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00308Q8TCZ7 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00308Q8TCZ7 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00308Q8TCZ7 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00308Q8TCZ7 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00308Q8TCZ7 THA1P-201ENST00000590384 1145 ntBASIC14.03□□□□□ -0.16
LINC00308Q8TCZ7 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00308Q8TCZ7 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC14.03□□□□□ -0.16
LINC00308Q8TCZ7 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00308Q8TCZ7 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00308Q8TCZ7 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00308Q8TCZ7 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC14.03□□□□□ -0.16
LINC00308Q8TCZ7 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00308Q8TCZ7 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00308Q8TCZ7 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00308Q8TCZ7 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00308Q8TCZ7 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00308Q8TCZ7 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00308Q8TCZ7 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00308Q8TCZ7 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00308Q8TCZ7 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC14.02□□□□□ -0.16
LINC00308Q8TCZ7 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00308Q8TCZ7 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00308Q8TCZ7 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00308Q8TCZ7 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00308Q8TCZ7 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00308Q8TCZ7 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00308Q8TCZ7 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00308Q8TCZ7 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00308Q8TCZ7 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC14.02□□□□□ -0.16
LINC00308Q8TCZ7 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
LINC00308Q8TCZ7 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00308Q8TCZ7 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00308Q8TCZ7 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC14.02□□□□□ -0.17
LINC00308Q8TCZ7 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC14.02□□□□□ -0.17
LINC00308Q8TCZ7 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00308Q8TCZ7 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00308Q8TCZ7 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
LINC00308Q8TCZ7 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC14.02□□□□□ -0.17
LINC00308Q8TCZ7 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC14.02□□□□□ -0.17
LINC00308Q8TCZ7 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
LINC00308Q8TCZ7 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00308Q8TCZ7 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00308Q8TCZ7 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00308Q8TCZ7 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00308Q8TCZ7 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
LINC00308Q8TCZ7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00308Q8TCZ7 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LINC00308Q8TCZ7 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00308Q8TCZ7 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00308Q8TCZ7 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
LINC00308Q8TCZ7 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
LINC00308Q8TCZ7 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
LINC00308Q8TCZ7 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
LINC00308Q8TCZ7 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00308Q8TCZ7 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LINC00308Q8TCZ7 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC14.01□□□□□ -0.17
LINC00308Q8TCZ7 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC00308Q8TCZ7 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC00308Q8TCZ7 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00308Q8TCZ7 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00308Q8TCZ7 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00308Q8TCZ7 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00308Q8TCZ7 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC14□□□□□ -0.17
LINC00308Q8TCZ7 BID-204ENST00000399767 2129 ntTSL 2 BASIC14□□□□□ -0.17
LINC00308Q8TCZ7 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00308Q8TCZ7 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
LINC00308Q8TCZ7 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00308Q8TCZ7 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC14□□□□□ -0.17
LINC00308Q8TCZ7 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00308Q8TCZ7 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00308Q8TCZ7 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00308Q8TCZ7 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC00308Q8TCZ7 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00308Q8TCZ7 MTX2-204ENST00000443241 799 ntTSL 3 BASIC14□□□□□ -0.17
LINC00308Q8TCZ7 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00308Q8TCZ7 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00308Q8TCZ7 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC14□□□□□ -0.17
LINC00308Q8TCZ7 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC00308Q8TCZ7 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC00308Q8TCZ7 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00308Q8TCZ7 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC14□□□□□ -0.17
LINC00308Q8TCZ7 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC00308Q8TCZ7 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00308Q8TCZ7 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00308Q8TCZ7 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00308Q8TCZ7 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00308Q8TCZ7 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
LINC00308Q8TCZ7 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00308Q8TCZ7 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00308Q8TCZ7 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00308Q8TCZ7 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC13.99□□□□□ -0.17
LINC00308Q8TCZ7 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00308Q8TCZ7 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00308Q8TCZ7 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms